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CAZyme Information: MGYG000002370_01401
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Clostridioides difficile_A | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile_A | |||||||||||
| CAZyme ID | MGYG000002370_01401 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 246929; End: 248752 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4193 | LytD | 5.75e-54 | 386 | 607 | 41 | 245 | Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]. |
| COG3103 | YgiM | 8.69e-19 | 105 | 222 | 33 | 149 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
| COG3103 | YgiM | 2.20e-15 | 169 | 305 | 29 | 155 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
| smart00047 | LYZ2 | 2.46e-15 | 445 | 587 | 7 | 137 | Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes. |
| COG3103 | YgiM | 1.33e-13 | 1 | 222 | 2 | 195 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AXU63976.1 | 0.0 | 1 | 607 | 1 | 607 |
| AWH76977.1 | 0.0 | 1 | 607 | 1 | 607 |
| AXU45848.1 | 0.0 | 1 | 607 | 1 | 607 |
| CDS86598.1 | 0.0 | 1 | 607 | 1 | 607 |
| CDT19015.1 | 0.0 | 1 | 607 | 1 | 607 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5WQW_A | 8.22e-40 | 395 | 606 | 41 | 269 | X-raystructure of catalytic domain of autolysin from Clostridium perfringens [Clostridium perfringens str. 13] |
| 6FXO_A | 7.11e-28 | 393 | 607 | 37 | 244 | ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI7_A | 6.06e-25 | 446 | 587 | 79 | 209 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI8_A | 3.86e-24 | 446 | 587 | 79 | 209 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 6FXP_A | 1.27e-23 | 386 | 588 | 39 | 228 | ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P39848 | 4.26e-36 | 395 | 607 | 681 | 880 | Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1 |
| O32041 | 3.49e-29 | 93 | 303 | 26 | 243 | Putative N-acetylmuramoyl-L-alanine amidase YrvJ OS=Bacillus subtilis (strain 168) OX=224308 GN=yrvJ PE=3 SV=1 |
| Q5HQB9 | 8.04e-29 | 395 | 607 | 1130 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1 |
| O33635 | 8.04e-29 | 395 | 607 | 1130 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1 |
| Q8CPQ1 | 1.42e-28 | 395 | 607 | 1130 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000359 | 0.998748 | 0.000247 | 0.000238 | 0.000221 | 0.000189 |