CAZyme Information: MGYG000002372_01589

Basic Information

• Species: Clostridium_P perfringens
• Lineage: Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_P; Clostridium_P perfringens
• CAZyme ID: MGYG000002372_01589
• CAZy Family: GH73
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1129		122720.62	9.2172

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002372	3343822	Isolate	South Korea	Asia

• Gene Location: Start: 1729119; End: 1732508 Strand: -

Full Sequence      

MNRNRLSCLIVGAVIGAGAIVCTTNTKVHAKPVNEVKNINTSKGNSFGEIISSEDLGLRK
GADSSHEIITSIPRGARVNIIDKVSDNWYKVGYKDFVGYVEAKDIRVLGDNLNQDNVGLI
SANQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYVNLISYK
NNEVKTEVKKEPIEGTGKVNINTALNVRQASTTNSRIIGSLKGGEKVNIISESNGFYKIE
FNNSYGYVYSKYISKDGDSEKVQVVKQEEVKKEKVDESKKEAKATPKAEPVVLAVRALNK
TGIVNVSSSLNVRNEASTSSKVIGSLSGNSKVTIVGEEGAFYKIEYKGSQGYVAKEYIKD
VTESNNSNQGTQTPEKQSTPENTEKTGVVNVSSSLNVREGAGTSSKVIGSLSGNTKVTIV
GEDGAFYKIEYKGSHGYVAKEYVKDVTESNNSNQGTQTPEKPSTPESTEKTGIVNVSSSL
NVREGASTSSKVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDVTESNNSNQG
TQTPEKPSTPESTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGEFYKIE
YKGSHGYVAKEYIKDVTESNNSNQGTQTPEKPSTPENTERTGVVNVSSSLNVREGASTSS
KVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKNIKDEVVTEPEKPSTPENTEK
TGVVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKD
IKDEVVTEPEKPSNPENSKKTGVVTASKGLNVRKEANTSSQIIGILNSGESVEIIGEENG
FYKITYKGQEAYASKNYINIFDGNSNVNPGLDIGNASKTNYGVSLNEYIKLQQRNNPSNY
SYSEFEKYINPAKATNKLQFLRIDKFRSVNVSRLSSRLSNKGVLTGQGQAFVNAAKAFNI
DPIYLVAQCLHETGNGTSKLAKGVTITEIADESKPIYNGNGQLVGYHMIKLSKPVTVYNL
FGIGAKDNSSVFPNRALILGTTYAYNRGWTSIENAIKGAAEFVSLNYVHSSRYSQNTLYK
MRYNQNVSNIWHQYATTPWYASSIADIMRSYQDLYLENNFTFDVPVFAG

Enzyme Prediction     

EC	3.2.1.-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH73	948	1112	1.8e-28	0.9765625

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG4193	LytD	2.13e-39	877	1127	20	244	Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047	LYZ2	7.88e-17	938	1111	3	139	Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
COG3103	YgiM	6.46e-13	548	726	17	169	Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only].
COG3103	YgiM	1.61e-12	713	872	17	163	Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only].
COG3103	YgiM	1.72e-12	378	543	17	167	Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AOY53990.1	0.0	1	1129	1	1129
SQG39099.1	0.0	1	1129	1	1129
ALG48779.1	0.0	1	1129	1	1134
SQI04537.1	0.0	1	1129	1	1134
BAB80937.1	0.0	1	1129	1	1129

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5WQW_A	3.22e-175	871	1129	13	271	X-raystructure of catalytic domain of autolysin from Clostridium perfringens [Clostridium perfringens str. 13]
2KT8_A	3.87e-34	719	786	2	69	SolutionNMR structure of the CPE1231(468-535) protein from Clostridium perfringens, Northeast Structural Genomics Consortium Target CpR82B [Clostridium perfringens]
6FXO_A	3.87e-30	917	1125	61	241	ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
2KYB_A	1.58e-28	470	528	2	60	Solutionstructure of CpR82G from Clostridium perfringens. North East Structural Genomics Consortium Target CpR82g [Clostridium perfringens ATCC 13124]
4PI7_A	2.82e-19	903	1119	39	220	ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P39848	3.65e-30	801	1125	632	877	Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1
Q8CPQ1	1.37e-29	882	1127	1102	1334	Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
Q5HQB9	3.11e-29	882	1127	1102	1334	Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
O33635	3.11e-29	882	1127	1102	1334	Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q99V41	2.06e-26	917	1125	1065	1245	Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000860	0.345738	0.652424	0.000465	0.000286	0.000204

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002372_01589.