CAZyme Information: MGYG000002372_01630

Basic Information

• Species: Clostridium_P perfringens
• Lineage: Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_P; Clostridium_P perfringens
• CAZyme ID: MGYG000002372_01630
• CAZy Family: CBM32
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1588	MGYG000002372_1|CGC25	178400.01	4.3529

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002372	3343822	Isolate	South Korea	Asia

• Gene Location: Start: 1786299; End: 1791065 Strand: -

Full Sequence      

MQVNKLSKKSLSLTLGLSVALTNTAPLSVLANGSKVEDVVASKSQDKITIGNEYISREFS
IENGKVLTSEIENSRANTTLVPQLGSEDFIINTIQENSDLPEVEANSPKEVLDRANWNAT
LTANSGTAYPATDIEKLFDGDKNTYIDSYNITGYPTSLKIDLGEVKTVSSFSYQKRPGFT
DANYGKNGTMGQYKLYVSEDGENWTEAGEGEFTREDFNLHQEGNLHNVGDVVYGNFDKTY
ESRYIRIDQLSDALGNTQEFSGAEINLYSDKYEKPEEPIAPKTAIKSSDLTIDTSSTKIE
DIENGKKLTISYEPYDFNGTEYNIDMVTVLENDDHYMRSFLEIKTNNENAKIDYIDLDHF
ILEEGIKDTLWSHPDLEDVTSILIGKNELMLGQPIYANGMFFGSEFPATDTDVVDDGMQI
RYYSGKSFEELERDNQLTTDGKFVSWQNVVGAAKGVDTDVVQTDFFEYISEIATPTDFRK
QYNSWYDNMLTITDESISKSFYGTEKGLTENGVEPIDSYVVDDGWHNYRDPEFNPNISKE
QAGNSMNRTGFWEFNDKFPNELYTSTELTSKFQSKFGLWLGPQGGYNFYGGFARYLEKMG
TGYAQTNNGVNVCVGSDRYIKNLTSLFLDYQKRFDIDYWKLDGFALRPCTSENHDHMTGG
HNNMYYTTDLWEKWTDAWETMRASRAEEGKDLFINATCYVNLSPWILQWVNTVWIQNSQD
TGEAGTGSRHQQKITYRDAVYHDIYKSNQIQFPAKNIYNHEPIYGVSDGSFATTEDFRDF
LFANAVRGTAFWELYYSPSIMDDEKWKVNADVLDFVENNFNVLEKAKLFGHRATEGVYGY
SAWDGNEGIVSFRNPTGETKEYTLDLTDIVGVPKSVSNLKGNQVLPYKVGDVGSVSYGDS
ITVTLEPYETRILQYGKVDNKACEIVSAKVTGENEITIKYNERVENGEGVYSVEGNEITE
TKLLDDYRTVVISTSNKLQGEAKLNINGERDALQNPLTTSLTIPVYNNGKIVSVQSGEEL
IGGENINKKYNGNSDTYFLEMNKAYEVDTNESFKGKTDFAISMAINTTSSNVNLLSQGEE
IKLSIDEEGYVNFKVKDLNLTSKSEVTTVTEKAHGTFGTNEYVETSTESTFVGKVNDGKL
HHISAVREVNGVLKVYIDGELMNSVYDKSLINQEINGGTIMVSDNNFTGVMGDIELRNSS
IYYDEAKELYNSYEGSDIIEYSRENWVTSACSEMNPPSGNDGPASYAIDGNESTLWHTNY
VGGDNHSGNHWLSVDFGEELDFDTVNVLSRGKEINGSIKGYKLEANINGEWTVVKEGEFT
DGVEEKIELDEAIKANGIKLTVLSTFNGQNFAAVREISVAKKDREATEDEINELKALVKE
INKEDYTKATAYRYIKVVEKVNALDKINLSQLDRLRSDLNKAYEGLVEARELNKTLVEAN
KLIKEDYTIESWIVFEEALNHAKDLNNDIEATKEGVDEATSRLKEAMNSLEKVNNEGEIV
IGTVNNFEASEIAKKNVTVTWSAPESTKGLEGYVLYRDGKKVAEIGAEETSYNFKGLSRH
TIYNFKIAAKYSNGELSKKESITLRTAR

Enzyme Prediction     

EC	3.2.1.50

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM32	1235	1357	2.7e-20	0.9032258064516129
CBM32	123	265	3.9e-20	0.9274193548387096

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00754	F5_F8_type_C	7.36e-17	1237	1357	7	127	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754	F5_F8_type_C	4.61e-11	125	256	5	119	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057	FA58C	3.83e-09	114	252	9	131	Substituted updates: Jan 31, 2002
cd00063	FN3	4.24e-08	1502	1575	2	82	Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
smart00060	FN3	2.56e-06	1502	1575	2	82	Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AOY54034.1	0.0	1	1588	1	1588
BAB80970.1	0.0	1	1588	1	1588
ABG83191.1	0.0	1	1588	1	1588
AQW23840.1	0.0	1	1588	1	1588
SQG39183.1	0.0	1	1588	1	1588

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2W1N_A	7.51e-39	1498	1588	148	238	cohesinand fibronectin type-III double module construct from the Clostridium perfringens glycoside hydrolase GH84C [Clostridium perfringens]
2V72_A	3.13e-10	1216	1359	4	141	Thestructure of the family 32 CBM from C. perfringens NanJ in complex with galactose [Clostridium perfringens]
2J1A_A	3.69e-10	1214	1359	1	148	Structureof CBM32 from Clostridium perfringens beta-N- acetylhexosaminidase GH84C in complex with galactose [Clostridium perfringens ATCC 13124],2J1E_A High Resolution Crystal Structure of CBM32 from a N-acetyl-beta- hexosaminidase in complex with lacNAc [Clostridium perfringens ATCC 13124]
2J7M_A	4.90e-10	1215	1359	1	147	Characterizationof a Family 32 CBM [Clostridium perfringens]
2V5D_A	2.11e-08	1238	1359	609	735	Structureof a Family 84 Glycoside Hydrolase and a Family 32 Carbohydrate-Binding Module in Tandem from Clostridium perfringens. [Clostridium perfringens]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q8XL08	1.51e-47	1238	1588	639	1001	O-GlcNAcase NagJ OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=nagJ PE=1 SV=1
Q0TR53	6.09e-47	1238	1588	639	1001	O-GlcNAcase NagJ OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=nagJ PE=1 SV=1
Q02834	5.52e-07	1241	1359	523	643	Sialidase OS=Micromonospora viridifaciens OX=1881 GN=nedA PE=1 SV=1
P29767	5.81e-06	1196	1359	19	183	Sialidase OS=Clostridium septicum OX=1504 PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000372	0.998849	0.000220	0.000214	0.000185	0.000152

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002372_01630.