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CAZyme Information: MGYG000002372_01630

You are here: Home > Sequence: MGYG000002372_01630

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_P perfringens
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_P; Clostridium_P perfringens
CAZyme ID MGYG000002372_01630
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1588 MGYG000002372_1|CGC25 178400.01 4.3529
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002372 3343822 Isolate South Korea Asia
Gene Location Start: 1786299;  End: 1791065  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.50

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM32 1235 1357 2.7e-20 0.9032258064516129
CBM32 123 265 3.9e-20 0.9274193548387096

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 7.36e-17 1237 1357 7 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754 F5_F8_type_C 4.61e-11 125 256 5 119
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 3.83e-09 114 252 9 131
Substituted updates: Jan 31, 2002
cd00063 FN3 4.24e-08 1502 1575 2 82
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
smart00060 FN3 2.56e-06 1502 1575 2 82
Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AOY54034.1 0.0 1 1588 1 1588
BAB80970.1 0.0 1 1588 1 1588
ABG83191.1 0.0 1 1588 1 1588
AQW23840.1 0.0 1 1588 1 1588
SQG39183.1 0.0 1 1588 1 1588

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2W1N_A 7.51e-39 1498 1588 148 238
cohesinand fibronectin type-III double module construct from the Clostridium perfringens glycoside hydrolase GH84C [Clostridium perfringens]
2V72_A 3.13e-10 1216 1359 4 141
Thestructure of the family 32 CBM from C. perfringens NanJ in complex with galactose [Clostridium perfringens]
2J1A_A 3.69e-10 1214 1359 1 148
Structureof CBM32 from Clostridium perfringens beta-N- acetylhexosaminidase GH84C in complex with galactose [Clostridium perfringens ATCC 13124],2J1E_A High Resolution Crystal Structure of CBM32 from a N-acetyl-beta- hexosaminidase in complex with lacNAc [Clostridium perfringens ATCC 13124]
2J7M_A 4.90e-10 1215 1359 1 147
Characterizationof a Family 32 CBM [Clostridium perfringens]
2V5D_A 2.11e-08 1238 1359 609 735
Structureof a Family 84 Glycoside Hydrolase and a Family 32 Carbohydrate-Binding Module in Tandem from Clostridium perfringens. [Clostridium perfringens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8XL08 1.51e-47 1238 1588 639 1001
O-GlcNAcase NagJ OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=nagJ PE=1 SV=1
Q0TR53 6.09e-47 1238 1588 639 1001
O-GlcNAcase NagJ OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=nagJ PE=1 SV=1
Q02834 5.52e-07 1241 1359 523 643
Sialidase OS=Micromonospora viridifaciens OX=1881 GN=nedA PE=1 SV=1
P29767 5.81e-06 1196 1359 19 183
Sialidase OS=Clostridium septicum OX=1504 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000372 0.998849 0.000220 0.000214 0.000185 0.000152

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002372_01630.