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CAZyme Information: MGYG000002381_02556

You are here: Home > Sequence: MGYG000002381_02556

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Stenotrophomonas bentonitica_A
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas bentonitica_A
CAZyme ID MGYG000002381_02556
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1039 111855.32 6.9633
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002381 4114425 Isolate not provided not provided
Gene Location Start: 152412;  End: 155531  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002381_02556.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM32 46 160 4.3e-21 0.9274193548387096

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 2.17e-14 45 160 1 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 8.10e-08 44 144 12 126
Substituted updates: Jan 31, 2002
pfam17132 Glyco_hydro_106 1.61e-04 58 145 185 283
alpha-L-rhamnosidase.
PRK12323 PRK12323 0.001 423 609 361 535
DNA polymerase III subunit gamma/tau.
smart00231 FA58C 0.002 36 163 4 137
Coagulation factor 5/8 C-terminal domain, discoidin domain. Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AHY59267.1 0.0 1 1039 1 1038
QHB71177.1 0.0 1 1039 1 1038
QIO87942.1 0.0 1 1039 1 1039
QZN81545.1 0.0 1 1039 1 1038
ACF51406.1 0.0 1 1039 1 1038

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2RV9_A 9.09e-11 46 161 14 133
Solutionstructure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis]
4ZXE_A 9.31e-11 46 161 15 134
X-raycrystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis],4ZXE_B X-ray crystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis],4ZXE_C X-ray crystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis]
2RVA_A 2.10e-07 62 161 30 134
Solutionstructure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis]
4ZZ5_A 2.14e-07 62 161 31 135
X-raycrystal structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ5_B X-ray crystal structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ8_A X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ8_B X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000967 0.998038 0.000340 0.000247 0.000198 0.000157

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002381_02556.