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CAZyme Information: MGYG000002383_01590

You are here: Home > Sequence: MGYG000002383_01590

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lacticaseibacillus zeae
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lacticaseibacillus; Lacticaseibacillus zeae
CAZyme ID MGYG000002383_01590
CAZy Family GH59
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1448 154959.1 5.6669
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002383 3001027 Isolate Italy Europe
Gene Location Start: 254591;  End: 258937  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH59 65 786 3.4e-169 0.993660855784469

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02057 Glyco_hydro_59 8.11e-92 71 389 1 292
Glycosyl hydrolase family 59.
pfam17996 CE2_N 1.13e-05 842 910 18 84
Carbohydrate esterase 2 N-terminal. This is the N-terminal beta-sheet domain with jelly roll topology found in CE2 acetyl-esterase from the bacterium Clostridium thermocellum. This enzyme displays dual activities, it catalyses the deacetylation of plant polysaccharides and also potentiates the activity of its appended cellulase catalytic module through its noncatalytic cellulose binding function. This N-terminal jelly-roll domain appears to extend the substrate/cellulose binding cleft of the catalytic domain in C.thermocellum.
pfam07554 FIVAR 7.43e-04 1295 1356 4 69
FIVAR domain. This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Bacillus sp. Gellan lyase, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures.
COG5520 XynC 0.002 156 451 110 398
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam07554 FIVAR 0.003 1145 1208 1 69
FIVAR domain. This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Bacillus sp. Gellan lyase, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QVI32100.1 0.0 1 1448 1 1448
QXG58192.1 0.0 1 1448 1 1448
QVI36393.1 0.0 1 1448 1 1448
ARY90256.1 0.0 1 1448 1 1448
ASX15912.1 0.0 1 1446 1 1492

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4CCC_A 2.01e-14 68 396 22 325
StructureOf Mouse Galactocerebrosidase With 4nbdg: Enzyme-substrate Complex [Mus musculus],4CCD_A Structure Of Mouse Galactocerebrosidase With D-galactal: Enzyme-intermediate Complex [Mus musculus],4CCE_A Structure Of Mouse Galactocerebrosidase With Galactose: Enzyme-product Complex [Mus musculus],4UFH_A Mouse Galactocerebrosidase complexed with iso-galacto-fagomine IGF [Mus musculus],4UFI_A Mouse Galactocerebrosidase complexed with aza-galacto-fagomine AGF [Mus musculus],4UFJ_A Mouse Galactocerebrosidase complexed with iso-galacto-fagomine lactam IGL [Mus musculus],4UFK_A Mouse Galactocerebrosidase complexed with dideoxy-imino-lyxitol DIL [Mus musculus],4UFL_A Mouse Galactocerebrosidase complexed with deoxy-galacto-noeurostegine DGN [Mus musculus],4UFM_A Mouse Galactocerebrosidase complexed with 1-deoxy-galacto-nojirimycin DGJ [Mus musculus],5NXB_A Mouse galactocerebrosidase in complex with saposin A [Mus musculus],5NXB_B Mouse galactocerebrosidase in complex with saposin A [Mus musculus],6Y6S_A Chain A, Galactocerebrosidase [Mus musculus],6Y6T_A Chain A, Galactocerebrosidase [Mus musculus]
3ZR5_A 2.02e-14 68 396 24 327
STRUCTUREOF GALACTOCEREBROSIDASE FROM MOUSE [Mus musculus],3ZR6_A STRUCTURE OF GALACTOCEREBROSIDASE FROM MOUSE IN COMPLEX WITH GALACTOSE [Mus musculus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5SNX7 1.53e-19 68 396 30 332
Galactocerebrosidase OS=Danio rerio OX=7955 GN=galc PE=2 SV=1
O02791 5.65e-15 68 396 52 355
Galactocerebrosidase OS=Macaca mulatta OX=9544 GN=GALC PE=1 SV=2
P54803 1.69e-14 68 396 52 355
Galactocerebrosidase OS=Homo sapiens OX=9606 GN=GALC PE=1 SV=3
P54818 5.06e-14 20 396 21 355
Galactocerebrosidase OS=Mus musculus OX=10090 GN=Galc PE=1 SV=2
B5X3C1 6.48e-14 68 396 34 337
Galactocerebrosidase OS=Salmo salar OX=8030 GN=galc PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.010830 0.988242 0.000259 0.000259 0.000198 0.000189

TMHMM  Annotations      download full data without filtering help

start end
17 39
1417 1439