Species | Lacticaseibacillus zeae | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lacticaseibacillus; Lacticaseibacillus zeae | |||||||||||
CAZyme ID | MGYG000002383_01889 | |||||||||||
CAZy Family | GH136 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
|
|||||||||||
Genome Property |
|
|||||||||||
Gene Location | Start: 569490; End: 571769 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH136 | 39 | 613 | 1.6e-132 | 0.9938900203665988 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
pfam07554 | FIVAR | 7.78e-07 | 626 | 689 | 3 | 69 | FIVAR domain. This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Bacillus sp. Gellan lyase, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures. |
pfam13229 | Beta_helix | 0.001 | 211 | 408 | 9 | 151 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
pfam13229 | Beta_helix | 0.008 | 148 | 326 | 3 | 134 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
pfam13229 | Beta_helix | 0.010 | 247 | 416 | 1 | 133 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QVI31874.1 | 0.0 | 1 | 759 | 1 | 759 |
QVI36696.1 | 0.0 | 1 | 759 | 1 | 759 |
QXG58488.1 | 0.0 | 1 | 759 | 1 | 759 |
ARY92660.1 | 0.0 | 1 | 759 | 1 | 759 |
ASX18217.1 | 0.0 | 1 | 759 | 1 | 756 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
7V6M_A | 5.34e-32 | 40 | 615 | 10 | 578 | ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis] |
6KQT_A | 1.94e-18 | 41 | 430 | 247 | 627 | CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099] |
6KQS_A | 5.90e-18 | 41 | 430 | 247 | 627 | CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099] |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.015559 | 0.980166 | 0.003395 | 0.000312 | 0.000267 | 0.000269 |
Copyright 2022 © YIN LAB, UNL. All rights reserved. Designed by Jinfang Zheng and Boyang Hu. Maintained by Yanbin Yin.