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CAZyme Information: MGYG000002388_02047

You are here: Home > Sequence: MGYG000002388_02047

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lacticaseibacillus paracasei
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lacticaseibacillus; Lacticaseibacillus paracasei
CAZyme ID MGYG000002388_02047
CAZy Family CBM50
CAZyme Description Chromosome partition protein Smc
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1038 110212.65 5.0295
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002388 3076437 Isolate China Asia
Gene Location Start: 2039128;  End: 2042244  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002388_02047.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4372 COG4372 4.58e-05 134 363 101 327
Uncharacterized conserved protein, contains DUF3084 domain [Function unknown].
PLN03223 PLN03223 3.00e-04 134 340 746 954
Polycystin cation channel protein; Provisional
COG3206 GumC 0.001 144 322 187 368
Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell wall/membrane/envelope biogenesis].
COG4942 EnvC 0.001 138 342 48 284
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning].
PRK11281 PRK11281 0.001 163 349 40 200
mechanosensitive channel MscK.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDR75842.1 0.0 1 1038 163 1200
AWN84295.1 0.0 1 1038 163 1200
AZP99300.1 0.0 1 1038 163 1200
QDP37371.1 0.0 1 1038 163 1200
QKK93766.1 0.0 1 1038 163 1194

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000035 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002388_02047.