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CAZyme Information: MGYG000002389_01475

You are here: Home > Sequence: MGYG000002389_01475

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Latilactobacillus sakei
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Latilactobacillus; Latilactobacillus sakei
CAZyme ID MGYG000002389_01475
CAZy Family GH73
CAZyme Description Cell division suppressor protein YneA
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
666 MGYG000002389_1|CGC10 71484.37 10.4478
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002389 1957804 Isolate not provided not provided
Gene Location Start: 1434720;  End: 1436720  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.- 3.2.1.17 3.2.1.96

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 172 313 2.6e-26 0.984375
CBM50 487 528 3.6e-17 0.95

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK06347 PRK06347 5.90e-115 2 666 1 592
1,4-beta-N-acetylmuramoylhydrolase.
PRK08581 PRK08581 2.34e-57 118 319 280 474
amidase domain-containing protein.
COG1705 FlgJ 3.68e-54 148 322 27 193
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
smart00047 LYZ2 1.27e-25 166 317 10 147
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
NF038016 sporang_Gsm 1.88e-21 167 317 163 312
sporangiospore maturation cell wall hydrolase GsmA. The peptidoglycan-hydrolyzing enzyme GsmA occurs in some sporangia-forming members of the Actinobacteria, such as Actinoplanes missouriensis, and is required for proper separation of spores. GsmA proteins have one or two SH3 domains N-terminal to the hydrolase domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SON65667.1 0.0 1 666 1 666
BAX67848.1 0.0 1 666 1 666
SON71762.1 0.0 1 666 1 669
CAI55739.1 0.0 2 666 1 668
SON73738.1 0.0 1 666 1 669

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3FI7_A 1.42e-44 153 317 19 183
CrystalStructure of the autolysin Auto (Lmo1076) from Listeria monocytogenes, catalytic domain [Listeria monocytogenes EGD-e]
5T1Q_A 4.37e-36 167 317 63 212
ChainA, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_B Chain B, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_C Chain C, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_D Chain D, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325]
5DN5_A 6.02e-10 188 310 27 147
Structureof a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_B Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_C Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
5DN4_A 8.12e-10 188 310 27 147
Structureof the glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
2MKX_A 7.23e-09 484 532 4 52
Solutionstructure of LysM the peptidoglycan binding domain of autolysin AtlA from Enterococcus faecalis [Enterococcus faecalis V583]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P39046 8.32e-115 167 661 65 602
Muramidase-2 OS=Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258 / NCTC 12367 / WDCM 00089 / R) OX=768486 GN=EHR_05900 PE=1 SV=1
P37710 8.29e-96 148 666 163 675
Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2
P0C2T5 1.48e-63 163 526 61 434
Probable N-acetylmuramidase OS=Lactococcus lactis subsp. cremoris OX=1359 GN=acmA PE=3 SV=1
A2RHZ5 2.06e-63 163 526 61 434
Probable N-acetylmuramidase OS=Lactococcus lactis subsp. cremoris (strain MG1363) OX=416870 GN=acmA PE=3 SV=1
Q9CIT4 2.23e-60 167 526 65 436
Probable N-acetylmuramidase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=acmA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.156892 0.821017 0.007670 0.011830 0.002171 0.000415

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002389_01475.