logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002393_02941

You are here: Home > Sequence: MGYG000002393_02941

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Merdimonas faecis
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Merdimonas; Merdimonas faecis
CAZyme ID MGYG000002393_02941
CAZy Family GH146
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
631 MGYG000002393_26|CGC1 72816.66 5.4713
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002393 3318223 Isolate South Korea Asia
Gene Location Start: 6780;  End: 8675  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002393_02941.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH146 71 575 1.3e-175 0.9880715705765407

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07944 Glyco_hydro_127 1.38e-136 76 575 11 503
Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533 COG3533 3.11e-81 69 584 14 510
Uncharacterized conserved protein, DUF1680 family [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWY98728.1 6.88e-198 44 630 175 754
QNM13425.1 1.61e-188 48 631 174 756
QOS77131.1 3.49e-185 69 629 197 763
ASR47498.1 3.25e-183 60 630 193 765
AET60941.1 2.37e-182 60 631 193 766

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6YQH_AAA 1.54e-70 69 575 35 560
ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]
5OPJ_A 4.68e-66 69 575 35 560
Beta-L-arabinofuranosidase[Bacteroides thetaiotaomicron]
6EX6_A 8.86e-23 198 583 142 553
TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000032 0.000020 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002393_02941.