logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002394_01341

You are here: Home > Sequence: MGYG000002394_01341

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella rara
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella rara
CAZyme ID MGYG000002394_01341
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
581 MGYG000002394_9|CGC1 63160.54 5.2437
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002394 3788330 Isolate Russia Europe
Gene Location Start: 72354;  End: 74099  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002394_01341.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 68 272 3.7e-69 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 4.45e-08 7 245 19 276
Pectate lyase [Carbohydrate transport and metabolism].
pfam18884 TSP3_bac 6.32e-04 459 480 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT67774.1 9.78e-286 14 581 2 586
AGB28243.1 1.14e-242 14 528 20 527
VEH16322.1 2.34e-237 14 528 25 532
QCD40778.1 3.23e-234 12 581 15 598
QCP73827.1 3.23e-234 12 581 15 598

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q0CLG7 5.12e-44 18 506 22 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
A1DPF0 9.50e-43 18 506 23 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B8NQQ7 1.77e-42 18 506 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
B0XMA2 4.74e-42 18 506 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 4.74e-42 18 506 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.972367 0.027568 0.000026 0.000030 0.000019 0.000025

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002394_01341.