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CAZyme Information: MGYG000002394_01836

You are here: Home > Sequence: MGYG000002394_01836

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella rara
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella rara
CAZyme ID MGYG000002394_01836
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1226 134490.2 6.4742
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002394 3788330 Isolate Russia Europe
Gene Location Start: 6079;  End: 9759  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002394_01836.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 357 656 8.1e-74 0.9826388888888888
PL1 802 998 2.4e-60 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01095 Pectinesterase 6.81e-48 357 656 3 295
Pectinesterase.
PLN02773 PLN02773 6.13e-41 358 656 9 296
pectinesterase
PLN02432 PLN02432 1.57e-37 358 656 15 286
putative pectinesterase
COG4677 PemB 2.07e-37 303 652 8 398
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02990 PLN02990 2.75e-37 357 636 262 532
Probable pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ANU63102.1 0.0 24 1214 24 1213
ASB38821.1 0.0 24 1214 24 1213
QQR09559.1 0.0 24 1214 24 1213
QCD41735.1 0.0 30 1217 32 1214
QCP72287.1 0.0 30 1208 38 1229

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1GQ8_A 3.34e-29 357 665 10 315
Pectinmethylesterase from Carrot [Daucus carota]
5C1E_A 5.38e-29 358 635 13 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 7.29e-29 358 635 13 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1XG2_A 4.54e-26 357 636 6 275
ChainA, Pectinesterase 1 [Solanum lycopersicum]
3UW0_A 2.29e-23 365 611 43 309
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5B297 7.98e-36 747 1208 21 413
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
O04887 8.14e-36 357 665 204 506
Pectinesterase 2 OS=Citrus sinensis OX=2711 GN=PECS-2.1 PE=2 SV=1
B8NQQ7 2.55e-35 747 1206 21 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q4WL88 6.40e-35 735 1206 13 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B0XMA2 6.40e-35 735 1206 13 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000352 0.998983 0.000197 0.000153 0.000142 0.000139

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002394_01836.