logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002395_01375

You are here: Home > Sequence: MGYG000002395_01375

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium adolescentis
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium adolescentis
CAZyme ID MGYG000002395_01375
CAZy Family GH3
CAZyme Description Beta-glucosidase BoGH3B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
776 MGYG000002395_1|CGC19 84106.92 4.5327
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002395 2173720 Isolate China Asia
Gene Location Start: 1587933;  End: 1590263  Strand: +

Full Sequence      Download help

MTNTTDLPYK  NPNLPAEERI  ADLLGRMTLE  EKVGQMMQLD  ARSGDLDDLI  VNKHVGSILH60
TSPADLPRAV  ETVNTKTRLG  IPLIIGDDCI  HGYSFWPGST  IFPSQLGMAT  SFDTAKVQAA120
GRATAEEVST  TGVHWTFSPV  LCIARDTRWG  RVDETFGEDP  YLIGEMASAI  VKGYQGGAKA180
GEPLAKDAIL  ACAKHFAGYS  ETQGGRDASE  ADLSHRKLES  WFLPPFERVA  KEGCGTFMLG240
YESIDGVPVT  FNKWLLSDKL  RGDWHYQGTL  ITDWDNVGRS  VWEQKVKADY  VHAAADAVKA300
GNDLIMTTPK  FYEGAIEAVR  TGLLDESLID  EAVSRILALK  FRLGLFEDPR  LPDQERIKTV360
IGSKAHQELN  LQIARESVAL  LKNDGALPFS  AAAGKRIAVV  GPLADDAQEQ  LGDWAGNSGQ420
VNWMPDGQPR  EMITTVLDGF  KQLAPEGCEV  AYSRGANIID  LVDDPEGEFY  PDGQPRPKLA480
VSAKFDQQLL  DEAVENARRS  DLVVAVVGDV  VQLVGETCST  ATLELLGGQN  AMLEALADVA540
RETGKPLVVV  LMSSKPQVMP  ACVIGTNGVI  VDESTADGVS  AFMWAPNPGM  KGGQAIAEII600
LGETEPSGRL  PITFPRHAGQ  LPVYYNQIRG  QHGNRYADLT  QDPAFAFGEG  LGYTTFEYGE660
PTITNVPASG  TFATTDTVHA  EVALTNTGER  KGIEVAQLYI  GDIVTSYSWT  DRELKAFQRV720
ELEPGETKTV  AFDIPVSGCT  IVDSDANRIV  EPGEFEVLIG  HSSRRRDLKR  TTFTVA776

Enzyme Prediction      help

EC 3.2.1.21

CAZyme Signature Domains help

Created with Snap387711615519423227131034938842646550454358262065969873775306GH3
Family Start End Evalue family coverage
GH3 75 306 5.9e-70 0.9814814814814815

CDD Domains      download full data without filtering help

Created with Snap387711615519423227131034938842646550454358262065969873711774PRK1509827415BglX5760PLN0308028339Glyco_hydro_3380653Glyco_hydro_3_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 1.93e-170 11 774 26 763
beta-glucosidase BglX.
COG1472 BglX 2.28e-88 27 415 1 372
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PLN03080 PLN03080 1.01e-67 5 760 38 769
Probable beta-xylosidase; Provisional
pfam00933 Glyco_hydro_3 1.06e-67 28 339 1 316
Glycosyl hydrolase family 3 N terminal domain.
pfam01915 Glyco_hydro_3_C 5.67e-41 380 653 3 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Created with Snap38771161551942322713103493884264655045435826206596987371776QHB63250.1|GH31776AJE06347.1|GH31776AXR42129.1|GH35776BAQ96830.1|GH35776AMK57051.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
QHB63250.1 0.0 1 776 1 776
AJE06347.1 0.0 1 776 16 791
AXR42129.1 0.0 1 776 1 776
BAQ96830.1 0.0 5 776 4 775
AMK57051.1 0.0 5 776 4 775

PDB Hits      download full data without filtering help

Created with Snap387711615519423227131034938842646550454358262065969873777765Z9S_A237755XXL_A237755XXN_A177726R5I_A117726R5P_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5Z9S_A 0.0 7 776 15 788
Functionaland Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria [Bifidobacterium longum],5Z9S_B Functional and Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria [Bifidobacterium longum]
5XXL_A 3.82e-127 23 775 17 751
Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
5XXN_A 2.09e-126 23 775 17 751
CrystalStructure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXN_B Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXO_A Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482],5XXO_B Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482]
6R5I_A 1.18e-124 17 772 4 731
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5P_A 3.87e-124 11 772 29 763
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5P_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Created with Snap38771161551942322713103493884264655045435826206596987379765sp|Q56078|BGLX_SALTY9765sp|P33363|BGLX_ECOLI11775sp|T2KMH0|PLH24_FORAG20761sp|Q23892|GLUA_DICDI12760sp|A7LXU3|BGH3B_BACO1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56078 1.70e-126 9 765 24 756
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363 2.12e-123 9 765 24 756
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
T2KMH0 3.15e-116 11 775 28 722
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
Q23892 7.56e-95 20 761 80 813
Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
A7LXU3 2.75e-82 12 760 30 762
Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000048 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002395_01375.