logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002395_01383

You are here: Home > Sequence: MGYG000002395_01383

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium adolescentis
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium adolescentis
CAZyme ID MGYG000002395_01383
CAZy Family GH42
CAZyme Description Beta-galactosidase BgaA
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
708 MGYG000002395_1|CGC19 79173.51 4.6932
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002395 2173720 Isolate China Asia
Gene Location Start: 1599889;  End: 1602015  Strand: -

Full Sequence      Download help

MGRYEADHIL  FGAAYYDEYL  MMKGIDHIDE  DMAMMKAAGL  NVIRIAESTW  STCEPQPGVF60
DFTYVDRALN  AAQRAGIDVI  VGTPTYAVPS  WLVKLDPSVL  AVTPNGQGKY  GARQIMDIVN120
ATYRFYGERV  IRKLISHVAD  HPAVIGYQVD  NETKYYDSVS  EDMQRLFVKY  LREKFHGDLD180
ELNHHFGLDY  WSNRIDSWED  FPDVTATINE  SLGGEFDKFR  RDQVRAFLQW  QADIVREYAH240
DDQFITHNFD  FEWRGYSYGV  QPAVDHFKAS  TAVDITGVDI  YHPTEDDLTG  KEIAFGGDMT300
RSTKDGRNYL  VLETEAQGQH  GWVPFPGQLR  LQAYSHLASG  ADMVEYWHWH  SIHNSFETYW360
KGLLSHDLEP  NPTYREAGVF  GREIAKPEVG  ERLVHLKKHN  KVAIMVSNES  LTALDWFLIE420
SGFPFGGTLK  YNDVVRNIYD  ALFELNVECD  FIPSDAPAER  LAKYEMIVTP  ALYCTPQETT480
DRLREFVSSG  GHLVSTMRSF  VTDDEVTVWH  DRAPHNLTDV  FGMTYNQFTR  PNGHVSVEFA540
GTLAKTPASD  AQALIELVTP  FDGTDVLASY  GHYAWKDYAA  VTRHGFGKGD  AEWIATLLDA600
DTIRAVLREA  VEHAGIADAG  TALAGQVTVR  RGTNARGEQV  TYLLNYSADE  VTIDSPVSGD660
VVVAPVVVGT  DGTVDESATA  AIALKEGSKV  EVGDRLTIGR  WNVVVIAG708

Enzyme Prediction      help

No EC number prediction in MGYG000002395_01383.

CAZyme Signature Domains help

Created with Snap357010614117721224728331835438942446049553156660163767215385GH42
Family Start End Evalue family coverage
GH42 15 385 1.7e-117 0.9919137466307277

CDD Domains      download full data without filtering help

Created with Snap357010614117721224728331835438942446049553156660163767228386Glyco_hydro_428659GanA400617Glyco_hydro_42M402514A4_beta-galactosidase_middle_domain34223Glyco_hydro_35
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02449 Glyco_hydro_42 1.84e-81 28 386 12 375
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
COG1874 GanA 8.10e-70 8 659 15 647
Beta-galactosidase GanA [Carbohydrate transport and metabolism].
pfam08532 Glyco_hydro_42M 1.79e-28 400 617 1 207
Beta-galactosidase trimerisation domain. This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain is involved in trimerisation.
cd03143 A4_beta-galactosidase_middle_domain 3.27e-18 402 514 1 104
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.
pfam01301 Glyco_hydro_35 2.28e-04 34 223 32 217
Glycosyl hydrolases family 35.

CAZyme Hits      help

Created with Snap35701061411772122472833183543894244604955315666016376721708QHB63260.1|GH421708AJE06356.1|GH421708AZH71901.1|GH421708AXR42137.1|GH421708AII77058.1|GH42
Hit ID E-Value Query Start Query End Hit Start Hit End
QHB63260.1 0.0 1 708 1 708
AJE06356.1 0.0 1 708 1 708
AZH71901.1 0.0 1 708 1 708
AXR42137.1 0.0 1 708 1 708
AII77058.1 0.0 1 708 1 708

PDB Hits      download full data without filtering help

Created with Snap357010614117721224728331835438942446049553156660163767217085XB7_A286583TTS_A297086LVW_A96565E9A_A306696Y2K_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5XB7_A 0.0 1 708 1 695
GH42alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_B GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_C GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_D GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_E GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_F GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis]
3TTS_A 1.33e-58 28 658 25 647
ChainA, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTS_B Chain B, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTS_C Chain C, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTS_D Chain D, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTS_E Chain E, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTS_F Chain F, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTY_A Chain A, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTY_B Chain B, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTY_C Chain C, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTY_D Chain D, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTY_E Chain E, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTY_F Chain F, Beta-galactosidase [Niallia circulans subsp. alkalophilus]
6LVW_A 3.20e-51 29 708 18 689
PolyextremophilicBeta-galactosidase from the Antarctic haloarchaeon Halorubrum lacusprofundi [Halorubrum lacusprofundi ATCC 49239]
5E9A_A 2.73e-47 9 656 39 680
Crystalstructure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3 [Rahnella sp. R3],5E9A_B Crystal structure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3 [Rahnella sp. R3],5E9A_C Crystal structure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3 [Rahnella sp. R3],5E9A_D Crystal structure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3 [Rahnella sp. R3],5E9A_E Crystal structure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3 [Rahnella sp. R3],5E9A_F Crystal structure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3 [Rahnella sp. R3]
6Y2K_A 4.61e-46 30 669 19 646
ChainA, beta-galactosidase [Marinomonas sp. ef1]

Swiss-Prot Hits      download full data without filtering help

Created with Snap357010614117721224728331835438942446049553156660163767229654sp|Q9KI47|BGAL_PLASS30609sp|P19668|BGAL_GEOKU29654sp|Q09HN2|BGAL_PLASL12656sp|P94804|BGAL_HALL230609sp|C9S0R2|BGAL_GEOSY
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9KI47 3.11e-59 29 654 27 645
Beta-galactosidase BgaA OS=Planococcus sp. (strain 'SOS Orange') OX=128803 GN=bgaA PE=1 SV=1
P19668 2.87e-55 30 609 25 589
Beta-galactosidase bgaB OS=Geobacillus kaustophilus OX=1462 GN=bgaB PE=1 SV=1
Q09HN2 4.17e-55 29 654 27 644
Beta-galactosidase BgaP OS=Planococcus sp. (strain L4) OX=377621 GN=bgaP PE=1 SV=1
P94804 1.22e-54 12 656 4 631
Beta-galactosidase BgaH OS=Haloferax lucentense (strain DSM 14919 / JCM 9276 / NCIMB 13854 / Aa 2.2) OX=1230452 GN=bgaH PE=1 SV=2
C9S0R2 1.91e-54 30 609 25 589
Beta-galactosidase BgaB OS=Geobacillus sp. (strain Y412MC61) OX=544556 GN=bgaB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002395_01383.