You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002398_00406
You are here: Home > Sequence: MGYG000002398_00406
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Laribacter hongkongensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Aquaspirillaceae; Laribacter; Laribacter hongkongensis | |||||||||||
| CAZyme ID | MGYG000002398_00406 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | Peptidoglycan hydrolase FlgJ | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 405700; End: 406647 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH73 | 175 | 312 | 7.7e-35 | 0.9609375 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| TIGR02541 | flagell_FlgJ | 3.09e-103 | 19 | 311 | 1 | 291 | flagellar rod assembly protein/muramidase FlgJ. The N-terminal region of this protein acts directly in flagellar rod assembly. The C-terminal region is a flagellum-specific muramidase (peptidoglycan hydrolase) required for formation of the outer membrane L ring. |
| PRK05684 | flgJ | 1.78e-99 | 10 | 312 | 1 | 296 | flagellar assembly peptidoglycan hydrolase FlgJ. |
| PRK12709 | flgJ | 8.89e-73 | 20 | 312 | 15 | 318 | flagellar rod assembly protein/muramidase FlgJ; Provisional |
| PRK12713 | flgJ | 3.80e-68 | 21 | 309 | 17 | 322 | flagellar rod assembly protein/muramidase FlgJ; Provisional |
| PRK12712 | flgJ | 1.86e-57 | 19 | 315 | 16 | 344 | flagellar rod assembly protein/muramidase FlgJ; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASJ23241.1 | 2.88e-221 | 1 | 315 | 1 | 315 |
| ACO73433.1 | 2.88e-221 | 1 | 315 | 1 | 315 |
| AVY93327.1 | 2.47e-133 | 16 | 313 | 10 | 309 |
| AXE32194.1 | 1.21e-85 | 19 | 310 | 18 | 308 |
| AXE33582.1 | 1.21e-85 | 19 | 310 | 18 | 308 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3VWO_A | 1.55e-44 | 168 | 309 | 2 | 142 | Crystalstructure of peptidoglycan hydrolase mutant from Sphingomonas sp. A1 [Sphingomonas sp. A1] |
| 2ZYC_A | 2.04e-44 | 168 | 309 | 3 | 143 | ChainA, Peptidoglycan hydrolase FlgJ [Sphingomonas sp. A1] |
| 3K3T_A | 1.60e-43 | 168 | 309 | 3 | 143 | E185Amutant of peptidoglycan hydrolase from Sphingomonas sp. A1 [Sphingomonas sp. A1] |
| 5DN5_A | 1.79e-35 | 170 | 315 | 6 | 150 | Structureof a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_B Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_C Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] |
| 5DN4_A | 2.75e-35 | 170 | 315 | 6 | 150 | Structureof the glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P75942 | 3.80e-51 | 20 | 312 | 12 | 293 | Peptidoglycan hydrolase FlgJ OS=Escherichia coli (strain K12) OX=83333 GN=flgJ PE=3 SV=1 |
| P58231 | 3.80e-51 | 20 | 312 | 12 | 293 | Peptidoglycan hydrolase FlgJ OS=Escherichia coli O157:H7 OX=83334 GN=flgJ PE=3 SV=1 |
| Q9I4P4 | 6.38e-50 | 9 | 312 | 7 | 384 | Peptidoglycan hydrolase FlgJ OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=flgJ PE=3 SV=1 |
| P15931 | 4.93e-49 | 20 | 315 | 12 | 299 | Peptidoglycan hydrolase FlgJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=flgJ PE=1 SV=1 |
| Q9X9J3 | 4.33e-44 | 15 | 312 | 6 | 304 | Peptidoglycan hydrolase FlgJ OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=flgJ PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000042 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |