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CAZyme Information: MGYG000002400_01284

You are here: Home > Sequence: MGYG000002400_01284

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus lugdunensis
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus lugdunensis
CAZyme ID MGYG000002400_01284
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
284 32736.02 7.6551
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002400 2523999 Isolate not provided not provided
Gene Location Start: 37242;  End: 38096  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002400_01284.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 132 258 4.9e-23 0.953125

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 1.26e-113 27 276 1 245
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 3.51e-29 134 265 16 145
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AMG60396.1 1.85e-206 1 284 1 284
QEX35225.1 1.85e-206 1 284 1 284
QRF17517.1 1.85e-206 1 284 1 284
AMG63409.1 1.85e-206 1 284 1 284
QEX25649.1 1.85e-206 1 284 1 284

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6U0O_B 2.75e-169 1 281 1 281
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]
6FXP_A 3.30e-153 31 281 1 251
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]
6FXO_A 3.91e-56 76 270 37 238
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
4PI7_A 2.12e-45 78 262 35 214
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 1.66e-44 78 262 35 214
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q6GAG0 9.80e-51 76 270 1043 1244
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1
Q8NX96 9.81e-51 76 270 1049 1250
Bifunctional autolysin OS=Staphylococcus aureus (strain MW2) OX=196620 GN=atl PE=3 SV=1
Q6GI31 9.81e-51 40 270 1015 1251
Bifunctional autolysin OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=atl PE=3 SV=1
Q99V41 1.33e-50 76 270 1041 1242
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1
A7X0T9 1.33e-50 76 270 1048 1249
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) OX=418127 GN=atl PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.992327 0.004542 0.000250 0.000046 0.000021 0.002851

TMHMM  Annotations      download full data without filtering help

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