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CAZyme Information: MGYG000002401_00731
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Propionibacterium freudenreichii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Propionibacteriales; Propionibacteriaceae; Propionibacterium; Propionibacterium freudenreichii | |||||||||||
| CAZyme ID | MGYG000002401_00731 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 810470; End: 814633 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd13402 | LT_TF-like | 5.87e-29 | 1215 | 1290 | 6 | 81 | lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
| COG3953 | SLT | 6.55e-19 | 1215 | 1349 | 20 | 170 | SLT domain protein [Mobilome: prophages, transposons]. |
| COG5412 | COG5412 | 5.05e-16 | 511 | 968 | 78 | 541 | Phage-related protein [Mobilome: prophages, transposons]. |
| COG5412 | COG5412 | 1.28e-09 | 670 | 1119 | 92 | 488 | Phage-related protein [Mobilome: prophages, transposons]. |
| TIGR01760 | tape_meas_TP901 | 3.21e-05 | 51 | 437 | 1 | 346 | phage tail tape measure protein, TP901 family, core region. This model represents a reasonably well conserved core region of a family of phage tail proteins. The member from phage TP901-1 was characterized as a tail length tape measure protein in that a shortened form of the protein leads to phage with proportionately shorter tails. [Mobile and extrachromosomal element functions, Prophage functions] |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ARO11721.1 | 0.0 | 10 | 1387 | 1 | 1378 |
| AOT24605.1 | 0.0 | 1 | 1387 | 1 | 1364 |
| AOT24429.1 | 0.0 | 1 | 1387 | 1 | 1364 |
| AOT24546.1 | 0.0 | 1 | 1387 | 1 | 1364 |
| AOT24368.1 | 0.0 | 1 | 1387 | 1 | 1326 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P45931 | 5.85e-20 | 1178 | 1318 | 1332 | 1472 | Uncharacterized protein YqbO OS=Bacillus subtilis (strain 168) OX=224308 GN=yqbO PE=1 SV=2 |
| P54334 | 2.11e-19 | 1178 | 1318 | 1080 | 1220 | Phage-like element PBSX protein XkdO OS=Bacillus subtilis (strain 168) OX=224308 GN=xkdO PE=4 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.998934 | 0.001059 | 0.000003 | 0.000003 | 0.000001 | 0.000002 |
TMHMM Annotations download full data without filtering help
| start | end |
|---|---|
| 333 | 355 |
| 368 | 390 |
| 414 | 436 |
| 443 | 465 |
| 497 | 516 |
| 529 | 551 |
| 566 | 588 |
| 595 | 617 |
| 672 | 694 |
| 707 | 729 |
| 744 | 766 |
| 773 | 795 |
| 799 | 821 |
| 826 | 848 |
| 853 | 875 |
| 888 | 910 |