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CAZyme Information: MGYG000002402_00710

You are here: Home > Sequence: MGYG000002402_00710

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_H massiliodielmoense
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_H; Clostridium_H massiliodielmoense
CAZyme ID MGYG000002402_00710
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
512 57678.92 9.8686
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002402 2759335 Isolate not provided not provided
Gene Location Start: 39074;  End: 40612  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002402_00710.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 358 493 1.3e-24 0.953125

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 2.93e-77 271 512 15 245
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 1.38e-25 347 501 2 145
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
pfam01832 Glucosaminidase 5.78e-09 358 444 1 76
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
pfam13205 Big_5 5.46e-05 37 126 18 106
Bacterial Ig-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABK61760.1 0.0 9 512 10 513
AEB77115.1 2.11e-241 4 512 4 512
QPW60744.1 2.19e-241 9 512 9 513
QPW53250.1 3.09e-231 1 512 1 511
QPW55358.1 1.25e-230 1 512 1 511

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 3.60e-49 304 512 37 244
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 4.66e-39 253 500 23 264
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]
5WQW_A 4.67e-39 277 511 21 269
X-raystructure of catalytic domain of autolysin from Clostridium perfringens [Clostridium perfringens str. 13]
6FXP_A 1.11e-38 274 500 13 234
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]
4PI7_A 1.05e-36 290 490 25 206
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P39848 3.26e-55 304 512 679 880
Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1
Q5HH31 5.89e-45 304 512 1049 1256
Bifunctional autolysin OS=Staphylococcus aureus (strain COL) OX=93062 GN=atl PE=3 SV=1
O33635 2.70e-44 272 512 1094 1335
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q5HQB9 2.70e-44 272 512 1094 1335
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
Q6GAG0 3.53e-44 304 512 1043 1250
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000256 0.999111 0.000181 0.000150 0.000137 0.000134

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002402_00710.