CAZyme Information: MGYG000002403_03473

Basic Information

• Species: Robinsoniella peoriensis
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella peoriensis
• CAZyme ID: MGYG000002403_03473
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
2217	MGYG000002403_95|CGC1	243875.29	4.6734

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002403	7202103	Isolate	not provided	not provided

• Gene Location: Start: 37382; End: 44035 Strand: -

Full Sequence      

MKLRRRLLSCLLATAVTVTSITPITAAASQGDLQIGSLKVNYLSEPLGIDDSQPVFSWIL
ASDGYDKGQSAYRIVVSSTREGAEKHEGDVWDSGKNENQNNYNITYQGNPLLSRTPYYWA
VQVWDEEGNDNGWSEVSSFETGIMSTDEWNGEWIGIKNTDMNFQGANWIWRRDGSDFSGA
PEGVQYFRKGFRTDKTKTISNVNIGITADDEYELFVNGQKAGENGGEDSWKNGKLYDITN
LISAEGENVIAASAHNTSRGYAGLLAKIEVLYNDGTKDTYVTDNSWKLSKTKEEGWSDQN
YNDTGWTNPDQSEPYGNSPWNSGVAPNAENAFAATVLRKEFKTEKGAIKDAKAYVSGLGF
FELKINGQLPDDTLLNPANTQYNQTSLYRVFDVTELVKEGKNAIGVELGNSFYNETCSVW
NWQDASWRDAPKLRMELEIEYENGEKESVVTDDSWKATKEGPITTNSIYYGETYDARKEL
NGFDLNDYDDTNWGAVQLMDAPEGKLKAQIMEPVRRTKEMQPSEITKLENGSYVLTIPEM
LAGWIKLDIKGANAGDKVTITYGEKLNDDGQVQKLGGKDGVNSGWWPRAYNQQDNYICKG
GKDVETFEPKFSYKGYQYVQIDGYPAELTADDVICYRVSNDMEDTGSFESSDELFNKMHQ
MMITTMKNNMQGKPTDTPVWEKNGWLGDANVALETMTYNFGFVNMLKQFVETMEDCQNEF
NNVPNMVPTQGWGNDNTVVWNSIFVFGVDQMIDTYGNESYLYEQYDAMRKLALKDMEESR
KNGWTWSDGQLADWVSPMGQGDADQDLQYSESPSEGSGICGTAFAYHLLDVMSQLADRMG
KTDDAAEYRAAMEKMYTAFNEKFYDAENQIYRTLTWSQQANRSRYRQTSQLVPLAYGLVP
EEYKDGVLTNLVNDIKDKNYHLDTGCVGSKFILPVLTDNGYADVAYKVAQQKSYPSWGFM
ADRGTSLWEMWETSSRSLGHYFLGTYDEWFYKGIGGIKDMQDGYKTVTIEPSLNETLTYA
KAGVNTVRGQLQSDWTLNEGQGVFDIQVPVGTTAEIILPTNNKDQITCNGQPLSESLDGI
HAVSNENGKVHIEAGSGNYKFETNVKLTSVEKIKLKKAILDAGSLKQLDYEMDAWTVFKA
VLEEASELDANPDAAQEEIDAMVKKLTDAAAELKLHVNQSRVALKEAVKNADEKVNPVAA
PIKYADAYQEAYDAAKAGCTNVELTNEEMDQLVLKLSNAETEMNSHLFQNLALNGNVAFS
TSHEDGYWGWGSKLINDGDRKNMNKDGEYTGYSSNTGDVKNEDHEEWVSIDLGKVQDINA
VSIYPAVKNPAVKNSGYGFPKNFEIQVSENGSDWTTVVTKENYPVPSYEPISFTFASANA
KYVKLFAKNLNPKANDHNFYYLQLSEFEVYHSENTIEEIVLADYEAPKSAVAYGEPLVDM
ADIKATINGKTDISGKWSVEMQDETAADVQKNPETGKYNVKLTFQAPNTYAFSDTLAGTA
ADGAKVSVEDNGKKLVYTYVTEVVKAAAPAVEEKEEYFVYAAGGEGQVSIADLMEKYQPF
VKFAVGNVTDEFGILDSKISIDEKGNLSFTVNTNGEAGQTAVIPVTVTMKNYEDTTVNVC
VSLTEKIPLEITSNARNVIYTGSPYAGLDNPSAVIKETLEAYTGEFIITYNTEDGSAPVK
EGNYTVTVTPEDPAYAGQWTGSFTISPALESVEAQIENPELFWDEDTQITGVAAIGSDGN
KMNLAGAGIVYRSEDSNIAIVDENGKVSARNAGSTKIIVTITIGEMEKSGEFAVTVSEIP
AISPVLASKTTTSVTLETVEGYEYAVQKENEEAAFSHVAEFKELEPGTSYKFYQRIAATD
THYAGSVSEVLEVSTDKEKIQGTITIKGNTKEGEKLTLDTTGIKNKKPGDLSITWKRGNQ
EVKGENGNTYALTKADVGYKISAVVTAKNLEGSLTTETALSVLPAVTPPPAKVDVDKVTL
NKSSVSIKIKKTVKLTAQVSPSNAADKSITWKSSKSSIVSVDKNGKVTAKKAGKATITAI
ASNGKSASCKITVTTDPAKIKLNTNKKTLGRKETYTLKTTLVPSTAVTSKIIFTSSNKKV
ATVDKKGRVKALKEGTAIITVRTANGKKATCNITVKKAPSSIKLNVGKKKNLKIGKTLKL
KVTRSAGSAGNVTFISKKEKVATVSSSGKIKAIKKGKAKIIAKTFNGKTAEVLITVK

Enzyme Prediction     

No EC number prediction in MGYG000002403_03473.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	525	1058	4.6e-138	0.998015873015873
CBM67	166	320	1.7e-34	0.9943181818181818
CBM67	331	502	5e-32	0.8977272727272727
CBM32	1262	1407	2.3e-18	0.9193548387096774

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	4.37e-89	643	994	1	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	1.84e-59	346	518	1	172	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592	Bac_rhamnosid	4.63e-22	526	639	1	102	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
COG5492	YjdB	8.26e-18	1903	2131	110	329	Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam08531	Bac_rhamnosid_N	4.40e-13	197	306	1	147	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCI59736.1	0.0	7	1426	11	1421
QYJ14959.1	3.21e-243	31	1101	35	1079
AQS56111.1	1.66e-236	89	1101	14	1014
SDU74751.1	3.39e-212	31	1101	44	1086
QFX79636.1	4.61e-207	33	1059	55	1063

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3W5M_A	5.61e-146	33	1101	4	1028	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6I60_A	2.08e-132	38	1101	35	939	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
6GSZ_A	7.67e-83	337	1066	134	854	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
6T0Q_A	5.95e-16	161	328	193	353	PleurotusOstreatus Lectin (POL), apo form [Pleurotus ostreatus]
6T1D_A	6.16e-16	161	328	196	356	PleurotusOstreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_B Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_C Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_D Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_E Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_F Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q82PP4	2.22e-145	33	1101	4	1028	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KPL4	6.25e-115	30	1104	27	950	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
T2KNB2	4.11e-102	46	1107	47	926	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03	1.64e-72	322	1061	158	881	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
P33747	1.45e-15	1978	2135	40	201	Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001388	0.981872	0.000453	0.015621	0.000363	0.000282

TMHMM  Annotations     

start	end
7	29