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CAZyme Information: MGYG000002403_04199
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Robinsoniella peoriensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella peoriensis | |||||||||||
| CAZyme ID | MGYG000002403_04199 | |||||||||||
| CAZy Family | GH140 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 183602; End: 188320 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH140 | 143 | 564 | 4e-57 | 0.9927184466019418 |
| CBM32 | 599 | 724 | 1.2e-21 | 0.9435483870967742 |
| CBM32 | 748 | 869 | 1.7e-21 | 0.9274193548387096 |
| CBM32 | 886 | 1008 | 9e-20 | 0.9435483870967742 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam13204 | DUF4038 | 2.13e-51 | 149 | 468 | 1 | 318 | Protein of unknown function (DUF4038). A family of putative cellulases. |
| pfam16586 | DUF5060 | 1.70e-23 | 44 | 113 | 1 | 70 | Domain of unknown function (DUF5060). This is the N-terminal domain of a putative glycoside hydrolase, DUF4038. It is found in a number of different bacterial orders. |
| COG5492 | YjdB | 9.33e-19 | 1324 | 1475 | 177 | 321 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
| pfam00754 | F5_F8_type_C | 1.33e-14 | 597 | 724 | 1 | 127 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
| pfam00754 | F5_F8_type_C | 2.78e-14 | 746 | 869 | 1 | 127 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QNK56434.1 | 1.05e-137 | 46 | 1011 | 38 | 962 |
| QTH41603.1 | 1.84e-105 | 5 | 728 | 3 | 700 |
| BBI36498.1 | 4.30e-94 | 48 | 1012 | 41 | 1051 |
| QTH45264.1 | 4.06e-90 | 44 | 573 | 39 | 573 |
| AZM49602.1 | 2.68e-86 | 24 | 568 | 19 | 569 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5MSY_A | 2.65e-21 | 141 | 543 | 15 | 420 | Glycosidehydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_B Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_C Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482] |
| 3KZS_A | 6.19e-19 | 141 | 543 | 15 | 420 | Crystalstructure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_B Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_C Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_D Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482] |
| 4QFU_A | 9.57e-19 | 140 | 543 | 27 | 436 | ChainA, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_B Chain B, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_C Chain C, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_D Chain D, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_E Chain E, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_F Chain F, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_G Chain G, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_H Chain H, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_I Chain I, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_J Chain J, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_K Chain K, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_L Chain L, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482] |
| 4N0R_A | 1.80e-09 | 44 | 327 | 4 | 282 | ChainA, putative glycoside hydrolase [Phocaeicola vulgatus ATCC 8482],4N0R_B Chain B, putative glycoside hydrolase [Phocaeicola vulgatus ATCC 8482] |
| 2QQI_A | 3.12e-06 | 912 | 1138 | 47 | 280 | CrystalStructure of the b1b2 Domains from Human Neuropilin-1 [Homo sapiens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P33747 | 7.27e-14 | 1324 | 1501 | 33 | 213 | Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2 |
| P35838 | 1.89e-06 | 1333 | 1409 | 241 | 317 | Uncharacterized protein CA_C0552 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_C0552 PE=4 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.001255 | 0.994954 | 0.002812 | 0.000403 | 0.000296 | 0.000235 |
