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CAZyme Information: MGYG000002406_00133
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Corynebacterium pacaense | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium pacaense | |||||||||||
| CAZyme ID | MGYG000002406_00133 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | Galactofuranosyltransferase GlfT2 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 101306; End: 103276 Strand: - | |||||||||||
Full Sequence Download help
| MSTTNLAVEQ LQRVLLPRRG EPADVRSLYL LEAEINKERL SWEDRFSVSV PAGAEVSFET | 60 |
| YFNAFPASYW RRWSQLDSVV LKLKVAGEAR VDLYRSKIDG ARIGIDGSVV KDETVEFEVS | 120 |
| LAPFEDGGWI WFDMTAETDA QIIEAGWFAP VAPGAQIMPD GTEVGPFEPR VTIGIPTFNR | 180 |
| PADAVAALEA LASDPAVDAV IDTVIMPDQG NRHPSDEPGY KAATGAFGDR FFEFRQGNLG | 240 |
| GSGGYSRIMF EALGGVDGDG AAGAKKSPYI LYMDDDIAIE PDSVLRALQV ARYAKSPILV | 300 |
| GGQMLNLQER SHLHSMGEVI NHHDFMWTAA PHVHYDHDFA KHPLSDRGRF GDKPDAPNSR | 360 |
| DLHRRIDVDF NGWWMCMIPR VVAERIGQPL PLFIKWDDVE YGLRAGSQGF PTATWPGIAI | 420 |
| WHMAWSDKDD AIDWQAYFHL RNRLIVAAMT HNGRVDGIIR SMQKATFKHL LCLEYSTVAI | 480 |
| QNEAMKDFLA GPEQLFDILD TSLPRIAAIR KTYPDAVVLP TAAELPSPSG APGVPTKDIG | 540 |
| GRLAPLKKAV WLARGLKHSL SRENPAHHEV PQANFAPIEA RWFSLSRVDG ATVTTADGRG | 600 |
| VVYRKRDRDR ARELAGEATR LQQEVEERFE ELRTRYRGAH GDLVSRESWG KVFDEQ | 656 |
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT2 | 169 | 446 | 3.4e-41 | 0.991304347826087 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam17994 | Glft2_N | 4.41e-93 | 11 | 150 | 1 | 140 | Galactofuranosyltransferase 2 N-terminal. This is the N-terminal beta-barrel domain found in the polymerizing galactofuranosyltransferase GlfT2 (Rv3808c). This enzyme synthesizes the bulk of the galactan portion of the mycolyl-arabinogalactan complex, which is the largest component of the mycobacterial cell wall such as in Mycobacterium tuberculosis. The N-terminal domain contains two short helices preceding a 10-stranded beta-sandwich with jelly roll topology. |
| COG1216 | GT2 | 2.01e-64 | 168 | 510 | 2 | 305 | Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]. |
| pfam13641 | Glyco_tranf_2_3 | 1.55e-16 | 169 | 443 | 2 | 226 | Glycosyltransferase like family 2. Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. |
| cd04185 | GT_2_like_b | 5.27e-06 | 364 | 446 | 115 | 202 | Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BAC19524.1 | 0.0 | 1 | 656 | 43 | 698 |
| AGG67847.1 | 0.0 | 1 | 656 | 1 | 656 |
| BAU97244.1 | 0.0 | 1 | 656 | 1 | 656 |
| ABC13304.1 | 0.0 | 1 | 656 | 8 | 663 |
| AMA01276.1 | 0.0 | 1 | 656 | 1 | 656 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4FIX_A | 7.98e-243 | 4 | 649 | 22 | 642 | CrystalStructure of GlfT2 [Mycobacterium tuberculosis H37Rv],4FIX_B Crystal Structure of GlfT2 [Mycobacterium tuberculosis H37Rv],4FIY_A Crystal Structure of GlfT2 Complexed with UDP [Mycobacterium tuberculosis H37Rv],4FIY_B Crystal Structure of GlfT2 Complexed with UDP [Mycobacterium tuberculosis H37Rv] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A0R628 | 1.12e-249 | 7 | 652 | 16 | 635 | Galactofuranosyltransferase GlfT2 OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=glfT2 PE=3 SV=1 |
| O53585 | 2.17e-242 | 4 | 649 | 2 | 622 | Galactofuranosyltransferase GlfT2 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=glfT2 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000060 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |