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CAZyme Information: MGYG000002406_00547

You are here: Home > Sequence: MGYG000002406_00547

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Corynebacterium pacaense
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium pacaense
CAZyme ID MGYG000002406_00547
CAZy Family GT85
CAZyme Description Galactan 5-O-arabinofuranosyltransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
686 74363 5.6506
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002406 3028764 Isolate not provided not provided
Gene Location Start: 579342;  End: 581402  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002406_00547.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT85 49 496 1.8e-153 0.990632318501171

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam12250 AftA_N 0.0 48 493 1 424
Arabinofuranosyltransferase N terminal. This domain family is found in bacteria, and is typically between 430 and 441 amino acids in length. This family is the N terminal region of AftA. The enzyme catalyzes the addition of the first key arabinofuranosyl residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol to the galactan domain of the cell wall, thus priming the galactan for further elaboration by the arabinofuranosyltransferases. The N terminal region has been predicted to span 11 transmembrane regions.
pfam12249 AftA_C 8.09e-101 503 684 1 177
Arabinofuranosyltransferase A C terminal. This domain family is found in bacteria, and is typically between 179 and 190 amino acids in length. This family is the C terminal region of AftA. The enzyme catalyzes the addition of the first key arabinofuranosyl residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol to the galactan domain of the cell wall, thus priming the galactan for further elaboration by the arabinofuranosyltransferases. The C terminal region is predicted to be directed towards the periplasm.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAC16972.1 0.0 1 686 1 703
AGG65634.1 8.97e-317 1 686 1 677
ALC04697.1 2.16e-316 1 686 1 681
BAB97581.1 3.92e-314 35 686 15 661
ASW12977.1 7.03e-314 35 686 31 677

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8NTW4 7.84e-315 35 686 15 661
Galactan 5-O-arabinofuranosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=aftA PE=1 SV=1
A0R611 2.75e-117 141 684 80 613
Galactan 5-O-arabinofuranosyltransferase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=aftA PE=3 SV=1
P9WN02 2.69e-107 46 684 32 637
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=aftA PE=3 SV=1
P9WN03 2.69e-107 46 684 32 637
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=aftA PE=1 SV=1
Q7TVN5 2.69e-107 46 684 32 637
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=aftA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000005 0.000032 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
45 67
82 104
129 151
217 236
243 262
289 323
335 357
385 407
414 436
446 468
481 503