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CAZyme Information: MGYG000002406_01262

You are here: Home > Sequence: MGYG000002406_01262

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Corynebacterium pacaense
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium pacaense
CAZyme ID MGYG000002406_01262
CAZy Family GT87
CAZyme Description Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
399 MGYG000002406_12|CGC9 43804.63 8.5832
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002406 3028764 Isolate not provided not provided
Gene Location Start: 1332903;  End: 1334102  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002406_01262.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT87 67 306 1.8e-59 0.9956709956709957

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK13375 pimE 1.34e-36 34 325 44 328
mannosyltransferase; Provisional
pfam09594 GT87 1.05e-28 67 306 1 237
Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAC18881.1 1.39e-147 9 390 13 395
AGG67272.1 3.04e-106 32 385 34 397
AMA00643.1 4.25e-99 31 379 39 396
AGN19680.1 1.20e-98 31 378 39 395
AGN22705.1 1.20e-98 31 378 39 395

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0R036 1.22e-43 23 384 35 413
Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=MSMEG_4247 PE=1 SV=1
P9WMZ8 3.63e-42 8 384 19 404
Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2236 PE=3 SV=1
P9WMZ9 3.63e-42 8 384 19 404
Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2181 PE=1 SV=1
A0R2K8 2.72e-23 35 323 57 338
Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=pimE PE=1 SV=2
P9WN00 1.78e-21 35 323 69 351
Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=pimE PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.231213 0.767185 0.000692 0.000295 0.000283 0.000317

TMHMM  Annotations      download full data without filtering help

start end
5 27
65 87
119 141
169 191
198 215
259 281
288 310
362 384