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CAZyme Information: MGYG000002406_01507

You are here: Home > Sequence: MGYG000002406_01507

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Corynebacterium pacaense
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium pacaense
CAZyme ID MGYG000002406_01507
CAZy Family GT87
CAZyme Description Alpha-(1->3)-arabinofuranosyltransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
395 43591.45 9.9241
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002406 3028764 Isolate not provided not provided
Gene Location Start: 91525;  End: 92712  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002406_01507.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT87 60 265 4.7e-21 0.8917748917748918

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09594 GT87 1.65e-23 59 284 1 232
Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SQH01790.1 3.94e-144 2 377 44 419
SQG50438.1 3.94e-144 2 377 44 419
SNV04228.1 3.94e-144 2 377 44 419
SQG58932.1 5.58e-144 2 377 44 419
BBJ74571.1 1.12e-143 2 377 44 419

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8NPB7 1.02e-210 1 375 23 397
Alpha-(1->3)-arabinofuranosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=aftC PE=3 SV=1
P9WMZ6 8.09e-93 3 361 38 399
Alpha-(1->3)-arabinofuranosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=aftC PE=3 SV=1
P9WMZ7 8.09e-93 3 361 38 399
Alpha-(1->3)-arabinofuranosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=aftC PE=1 SV=1
A0QW28 9.27e-88 3 385 34 419
Alpha-(1->3)-arabinofuranosyltransferase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=aftC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.901554 0.098002 0.000141 0.000086 0.000096 0.000144

TMHMM  Annotations      download full data without filtering help

start end
5 27
78 100
130 149
159 181
188 210
247 264
271 293
308 330
351 370