CAZyme Information: MGYG000002406_02010

Basic Information

• Species: Corynebacterium pacaense
• Lineage: Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium pacaense
• CAZyme ID: MGYG000002406_02010
• CAZy Family: CE14
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
227	MGYG000002406_13|CGC4	24085.24	4.5172

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002406	3028764	Isolate	not provided	not provided

• Gene Location: Start: 640571; End: 641254 Strand: -

Full Sequence      

MLVVVAHPDDPEYGLSAAVKHWTSAGVEVSYLLLTHGEAGISTLVPEETGPLRAAEQRAA
CTAVGVGDLVILNHPDSMLVYGLDLRLDIAREIRRVKPDAVVTASFEVEAYGGFNQADHR
VAGLAALDATRDAGNPWAHRGLLGSEQPWNVDQFLIFGADDPNVGLPVSRGCVDAAIESL
RCHSAYLAALPGHPAPEDLIPAALRGPAELFPDPGVEFAVNFTMHSI

Enzyme Prediction     

No EC number prediction in MGYG000002406_02010.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CE14	2	105	3.4e-24	0.9193548387096774

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG2120	LmbE	1.77e-35	2	212	14	216	N-acetylglucosaminyl deacetylase, LmbE family [Carbohydrate transport and metabolism].
pfam02585	PIG-L	2.28e-27	3	127	1	125	GlcNAc-PI de-N-acetylase. Members of this family are related to PIG-L an N-acetylglucosaminylphosphatidylinositol de-N-acetylase (EC:3.5.1.89) that catalyzes the second step in GPI biosynthesis.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UAC00209.1	2.96e-40	2	222	16	233
ASO22725.1	1.96e-33	1	212	44	258
QBI55232.1	2.75e-33	2	187	21	211
CCG05052.1	3.59e-33	1	183	18	204
AKL74176.1	2.08e-32	1	183	20	206

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5BMO_A	7.47e-47	1	197	18	217	LnmXprotein, a putative GlcNAc-PI de-N-acetylase from Streptomyces atroolivaceus [Streptomyces atroolivaceus],5BMO_B LnmX protein, a putative GlcNAc-PI de-N-acetylase from Streptomyces atroolivaceus [Streptomyces atroolivaceus],5BMO_C LnmX protein, a putative GlcNAc-PI de-N-acetylase from Streptomyces atroolivaceus [Streptomyces atroolivaceus]
4XM1_A	8.53e-13	1	183	34	215	N,N'-diacetylchitobiosedeacetylase from Pyrococcus furiosus in the presence of cadmium [Pyrococcus furiosus DSM 3638],4XM1_B N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the presence of cadmium [Pyrococcus furiosus DSM 3638],4XM1_C N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the presence of cadmium [Pyrococcus furiosus DSM 3638],4XM1_D N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the presence of cadmium [Pyrococcus furiosus DSM 3638],4XM1_E N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the presence of cadmium [Pyrococcus furiosus DSM 3638],4XM1_F N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the presence of cadmium [Pyrococcus furiosus DSM 3638],4XM2_A N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the absence of cadmium [Pyrococcus furiosus DSM 3638],4XM2_B N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the absence of cadmium [Pyrococcus furiosus DSM 3638],4XM2_C N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the absence of cadmium [Pyrococcus furiosus DSM 3638],4XM2_D N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the absence of cadmium [Pyrococcus furiosus DSM 3638],4XM2_E N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the absence of cadmium [Pyrococcus furiosus DSM 3638],4XM2_F N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the absence of cadmium [Pyrococcus furiosus DSM 3638]
3WL4_A	1.06e-11	1	183	34	215	N,N'-diacetylchitobiosedeacetylase (Se-derivative) from Pyrococcus furiosus [Pyrococcus furiosus DSM 3638],3WL4_B N,N'-diacetylchitobiose deacetylase (Se-derivative) from Pyrococcus furiosus [Pyrococcus furiosus DSM 3638],4XLZ_A N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the presence of cadmium [Pyrococcus furiosus DSM 3638],4XLZ_B N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the presence of cadmium [Pyrococcus furiosus DSM 3638],4XLZ_C N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the presence of cadmium [Pyrococcus furiosus DSM 3638],4XLZ_D N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the presence of cadmium [Pyrococcus furiosus DSM 3638],4XLZ_E N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the presence of cadmium [Pyrococcus furiosus DSM 3638],4XLZ_F N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the presence of cadmium [Pyrococcus furiosus DSM 3638],4XM0_A N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the absence of cadmium [Pyrococcus furiosus DSM 3638],4XM0_B N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the absence of cadmium [Pyrococcus furiosus DSM 3638],4XM0_C N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the absence of cadmium [Pyrococcus furiosus DSM 3638],4XM0_D N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the absence of cadmium [Pyrococcus furiosus DSM 3638],4XM0_E N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the absence of cadmium [Pyrococcus furiosus DSM 3638],4XM0_F N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the absence of cadmium [Pyrococcus furiosus DSM 3638]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q6F4N1	7.47e-14	1	183	34	215	Diacetylchitobiose deacetylase OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) OX=69014 GN=dac PE=1 SV=1
C6WKX3	2.62e-07	1	119	9	150	1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase OS=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / JCM 3225 / NBRC 14064 / NCIMB 13271 / NRRL B-12336 / IMRU 3971 / 101) OX=446462 GN=mshB PE=3 SV=1
Q81AU5	1.09e-06	1	103	5	114	Probable N-acetyl-alpha-D-glucosaminyl L-malate deacetylase 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=bshB2 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000051	0.000015	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002406_02010.