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CAZyme Information: MGYG000002407_04388

You are here: Home > Sequence: MGYG000002407_04388

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cohnella sp900169535
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Cohnella; Cohnella sp900169535
CAZyme ID MGYG000002407_04388
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
550 MGYG000002407_19|CGC21 62017.14 5.6783
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002407 6325359 Isolate not provided not provided
Gene Location Start: 1782071;  End: 1783723  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002407_04388.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10137 PRK10137 3.03e-05 228 341 579 704
alpha-glucosidase; Provisional
pfam17389 Bac_rhamnosid6H 0.002 111 259 73 203
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QLG41162.1 1.66e-292 4 549 3 547
ANY70639.1 2.16e-291 4 550 3 551
AVV55345.1 5.25e-289 4 550 3 548
AWP29929.1 5.25e-289 4 550 3 548
ANA80586.1 5.25e-289 4 550 3 548

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000067 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002407_04388.