CAZyme Information: MGYG000002407_04427

Basic Information

• Species: Cohnella sp900169535
• Lineage: Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Cohnella; Cohnella sp900169535
• CAZyme ID: MGYG000002407_04427
• CAZy Family: GH5
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1048	MGYG000002407_19|CGC22	115980.02	5.4711

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002407	6325359	Isolate	not provided	not provided

• Gene Location: Start: 1828691; End: 1831837 Strand: +

Full Sequence      

MSLESVVSSLPARVVILFDPGFPSSGAWTEAEAVQLGEFGSVVAAGELAQALDALGEGGV
FVNLHAPFFPKDAWPSILGFARRGGGLVSVGGAPFKRPVRLQEGRWIAEPEQTGYHQQLH
IHEALRVDGEIVATCVSSECIPLLRGDEGLVPLKEAWNLVPHVTKSSDHPDQMGSGGPMD
TRIYPLLKGISADGRERSAPAVLWENVGGPFKGSRWLFVGQPLPAGAESVKALKRWTAFA
ARGATELWLKPNYASYSAGERAALTLQTQRLGGPLPRAERETWRFELTVRREGAAEPEWT
QSLEADVTGELNFIRLTLPFEIGAGLYRVACEATSPSGERRVLRQAFWGHDAALLAQGKP
IQAGRDYFVQDGVPLPVVGMTYMTSDVARKFLQLPNADVWDRDMAQMKKAGINWIRTGIW
TAYRHIMLADGHASEEALRAIDAFLLTAARHELHVTFTFFSFTPETWEGTNPYLDPRSVE
AQKRFIRSIVSRHAATTHVDWDLINEPSMFDPPRIFSDGPRSARDPFERKAFGEWLERRH
GSIAALQEKWNMTPEQLPDFASAVPPEAEEINFSVQDIHSGKKGTRWLDYCLFSMDMHNR
WASELRGAIRELCPDHLVTVGQDEALGAQRPSPFFYGEAVDYTTVHTWWLNDDLLWDGIF
AKTADKPNLVQETGIMYVEKPDGRAKRTEAELRNLLERKYAYAFATGGSGAIQWIWNTNF
YMDNANESHIGALRADGTEKPEADVSYDFGRFMGGIRPLFAGRKLEEIAVVFPYSNDFSN
RKLAYDATTRATRSLAYELRLPFRGASEYHLDDLAANPAKLIVLPSPHNMDDEALAKLLR
IVGETGATLLATGPLGLDAYWRDSARLDGLLGAAEAGNVTRGERLVLGGKRLPGSFGRRR
IAELVKETRPTADGSGAGADELREVAVGSGKLIWCPLPVELNDRAETVAELYRHAAEAAG
IAAPLEWRKGGDEPGVYGRKLSFEQGHLFVFVSEAAWDAEIEIGDRDAGAAYAFKLEKER
SVLFATDRTGRVTAVYRPEEVEIRTFDF

Enzyme Prediction     

No EC number prediction in MGYG000002407_04427.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH5	384	719	3.3e-18	0.7818181818181819

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam02449	Glyco_hydro_42	8.52e-09	398	619	10	234	Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
cd03143	A4_beta-galactosidase_middle_domain	7.11e-06	769	890	2	125	A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.
COG1874	GanA	1.08e-04	365	619	5	255	Beta-galactosidase GanA [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QTH41876.1	0.0	13	1043	3	1029
QJC51567.1	0.0	12	1043	2	1035
QGG55714.1	0.0	12	1044	2	1036
SDR98930.1	0.0	15	1043	5	1036
SQI53800.1	0.0	14	1045	4	1025

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000051	0.000001	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002407_04427.