CAZyme Information: MGYG000002409_01395

Basic Information

• Species: Gordonibacter massiliensis
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Eggerthellaceae; Gordonibacter; Gordonibacter massiliensis
• CAZyme ID: MGYG000002409_01395
• CAZy Family: GT4
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
464	MGYG000002409_1|CGC5	50395.9	6.8369

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002409	3948172	Isolate	not provided	not provided

• Gene Location: Start: 1627597; End: 1628991 Strand: +

Full Sequence      

MDTNSQQTSTAKAANGASDDGRAASLRPTRPAERVGRKPKRIAVVTMGVKLGDETRGYTR
FRFLSELLAREGFSVDLITSTFQHWEKAQRDCSKACYQGLPYRIVFVEEPGYTRNLDLGR
IRSHRVAAKNLREHFARNAGAYDLVYAEIPPNDVARVCAEAADAQGIPFVADINDLWPEA
MRMVVDIPVVSDVAFYPFARDAKRVYQLLAGAVGTSDEYAARPAADRERPYPHVTVYVGN
DLAAFDAGAREHASEVEKPQGEIWVTYAGTLGASYDVATLVRAAALLEQERLAKAVDLAG
DAGCDRRTAASAAPPVRVKVLGDGPDREKLEALARELNAPADFLGYQDYGHMAAYLCASD
ITVNSLVRSAAQSIVTKIGDYLASGKPMINTGSSPEFRGKVTADGFGVNVQAEDPRALAG
EIATLAGHASLRKIMGAKARAVAEREFDQPRSYREIVDLLRTLL

Enzyme Prediction     

No EC number prediction in MGYG000002409_01395.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd03794	GT4_WbuB-like	8.12e-40	53	457	12	391	Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
cd03801	GT4_PimA-like	9.44e-21	59	461	18	366	phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.
COG0438	RfaB	1.64e-18	59	464	19	378	Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis].
cd03807	GT4_WbnK-like	4.03e-12	213	461	138	362	Shigella dysenteriae WbnK and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
cd03808	GT4_CapM-like	1.15e-11	232	448	165	349	capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. CapM in Staphylococcus aureus is required for the synthesis of type 1 capsular polysaccharides.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QOS67157.1	3.92e-251	37	464	9	429
ACV55985.1	4.49e-248	47	464	1	411
BAK44128.1	9.06e-231	40	464	23	456
AJC12291.1	2.88e-189	47	463	1	406
QTU85212.1	7.70e-183	47	464	1	402

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000086	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002409_01395.