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CAZyme Information: MGYG000002414_00250
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Paenibacillus odorifer | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus odorifer | |||||||||||
| CAZyme ID | MGYG000002414_00250 | |||||||||||
| CAZy Family | SLH | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 256358; End: 260656 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH26 | 456 | 768 | 1.9e-64 | 0.8976897689768977 |
| CBM23 | 930 | 1093 | 6.3e-49 | 0.9814814814814815 |
| CBM54 | 199 | 311 | 1e-32 | 0.9824561403508771 |
| CBM59 | 1122 | 1260 | 4.7e-31 | 0.9724137931034482 |
| CBM59 | 1300 | 1430 | 4e-19 | 0.8827586206896552 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam02156 | Glyco_hydro_26 | 1.56e-52 | 456 | 723 | 2 | 263 | Glycosyl hydrolase family 26. |
| COG4124 | ManB2 | 3.99e-17 | 544 | 733 | 104 | 299 | Beta-mannanase [Carbohydrate transport and metabolism]. |
| NF033190 | inl_like_NEAT_1 | 2.53e-08 | 35 | 138 | 643 | 748 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam00395 | SLH | 8.83e-08 | 35 | 75 | 1 | 42 | S-layer homology domain. |
| NF033190 | inl_like_NEAT_1 | 2.98e-07 | 29 | 205 | 576 | 754 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWV31354.1 | 0.0 | 1 | 1432 | 1 | 1432 |
| AEI39891.1 | 0.0 | 450 | 1265 | 87 | 901 |
| AFH60731.2 | 0.0 | 450 | 1265 | 90 | 904 |
| ANY66447.1 | 0.0 | 1 | 1432 | 1 | 1570 |
| QMV42451.1 | 0.0 | 2 | 1430 | 3 | 1560 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4YN5_A | 8.36e-132 | 444 | 835 | 41 | 442 | Catalyticdomain of Bacillus sp. JAMB-750 GH26 Endo-beta-1,4-mannanase [Bacillus sp. JAMB750] |
| 2BVT_A | 1.22e-118 | 454 | 909 | 8 | 457 | Thestructure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases. [Cellulomonas fimi],2BVT_B The structure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases. [Cellulomonas fimi],2BVY_A The structure and characterization of a modular endo-beta-1,4-mannanase from Cellulomonas fimi [Cellulomonas fimi] |
| 2X2Y_A | 8.43e-117 | 454 | 909 | 8 | 457 | Cellulomonasfimi endo-beta-1,4-mannanase double mutant [Cellulomonas fimi],2X2Y_B Cellulomonas fimi endo-beta-1,4-mannanase double mutant [Cellulomonas fimi] |
| 3TP4_A | 3.11e-107 | 454 | 909 | 8 | 457 | CrystalStructure of engineered protein at the resolution 1.98A, Northeast Structural Genomics Consortium Target OR128 [synthetic construct],3TP4_B Crystal Structure of engineered protein at the resolution 1.98A, Northeast Structural Genomics Consortium Target OR128 [synthetic construct] |
| 1J9Y_A | 5.44e-88 | 454 | 810 | 11 | 373 | Crystalstructure of mannanase 26A from Pseudomonas cellulosa [Cellvibrio japonicus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A1A278 | 3.74e-112 | 449 | 1234 | 37 | 838 | Mannan endo-1,4-beta-mannosidase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=BAD_1030 PE=1 SV=1 |
| P49424 | 9.53e-87 | 454 | 810 | 49 | 411 | Mannan endo-1,4-beta-mannosidase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=manA PE=1 SV=2 |
| O05512 | 1.57e-16 | 481 | 695 | 65 | 269 | Mannan endo-1,4-beta-mannosidase OS=Bacillus subtilis (strain 168) OX=224308 GN=gmuG PE=1 SV=2 |
| P55278 | 8.84e-16 | 499 | 695 | 74 | 267 | Mannan endo-1,4-beta-mannosidase OS=Bacillus subtilis OX=1423 PE=3 SV=1 |
| P38536 | 5.48e-15 | 35 | 200 | 1682 | 1851 | Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000202 | 0.999128 | 0.000186 | 0.000173 | 0.000154 | 0.000139 |
