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CAZyme Information: MGYG000002414_01686
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Paenibacillus odorifer | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus odorifer | |||||||||||
| CAZyme ID | MGYG000002414_01686 | |||||||||||
| CAZy Family | SLH | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1952359; End: 1955139 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM54 | 214 | 321 | 9.5e-32 | 0.9035087719298246 |
| SLH | 91 | 132 | 2.9e-18 | 0.9761904761904762 |
| SLH | 34 | 72 | 4e-17 | 0.9285714285714286 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| NF033190 | inl_like_NEAT_1 | 1.71e-12 | 37 | 202 | 587 | 753 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam00395 | SLH | 3.63e-12 | 91 | 132 | 1 | 42 | S-layer homology domain. |
| NF033190 | inl_like_NEAT_1 | 7.14e-11 | 76 | 208 | 567 | 698 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam00395 | SLH | 1.24e-08 | 151 | 193 | 1 | 42 | S-layer homology domain. |
| NF033190 | inl_like_NEAT_1 | 1.04e-07 | 31 | 133 | 641 | 745 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWV32637.1 | 0.0 | 1 | 926 | 1 | 926 |
| QUL56661.1 | 3.90e-160 | 9 | 839 | 9 | 895 |
| QGQ99803.1 | 7.42e-106 | 30 | 435 | 39 | 451 |
| BBH18797.1 | 2.74e-105 | 4 | 424 | 2 | 430 |
| QJD84667.1 | 1.07e-104 | 4 | 443 | 2 | 438 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5GZT_A | 1.57e-21 | 195 | 279 | 24 | 106 | CrystalStructure of Chitinase ChiW from Paenibacillus sp. str. FPU-7 Reveals a Novel Type of Bacterial Cell-Surface-Expressed Multi-Modular Enzyme Machinery [Paenibacillus sp. FPU-7] |
| 6BT4_A | 5.79e-10 | 25 | 211 | 22 | 201 | Crystalstructure of the SLH domain of Sap from Bacillus anthracis in complex with a pyruvylated SCWP unit [Bacillus anthracis] |
| 3PYW_A | 5.90e-10 | 25 | 211 | 1 | 180 | Thestructure of the SLH domain from B. anthracis surface array protein at 1.8A [Bacillus anthracis] |
| 5GZT_B | 7.41e-07 | 282 | 428 | 1 | 154 | CrystalStructure of Chitinase ChiW from Paenibacillus sp. str. FPU-7 Reveals a Novel Type of Bacterial Cell-Surface-Expressed Multi-Modular Enzyme Machinery [Paenibacillus sp. FPU-7] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q06848 | 8.07e-17 | 53 | 201 | 242 | 398 | Cellulosome-anchoring protein OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=ancA PE=1 SV=1 |
| P38535 | 1.19e-16 | 20 | 197 | 894 | 1077 | Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1 |
| Q06853 | 1.90e-16 | 54 | 201 | 484 | 638 | Cell surface glycoprotein 2 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=Cthe_3079 PE=1 SV=1 |
| C6CRV0 | 2.33e-16 | 40 | 199 | 1291 | 1457 | Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1 |
| Q06852 | 3.44e-16 | 51 | 201 | 2101 | 2264 | Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000532 | 0.998599 | 0.000295 | 0.000178 | 0.000182 | 0.000174 |
