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CAZyme Information: MGYG000002414_01926

You are here: Home > Sequence: MGYG000002414_01926

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus odorifer
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus odorifer
CAZyme ID MGYG000002414_01926
CAZy Family CE12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
486 MGYG000002414_1|CGC42 54552.07 5.3186
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002414 6802552 Isolate South Korea Asia
Gene Location Start: 2230987;  End: 2232447  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002414_01926.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE12 260 469 1.9e-77 0.9904761904761905

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01821 Rhamnogalacturan_acetylesterase_like 5.79e-90 258 469 1 198
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
COG2755 TesA 8.60e-23 254 470 5 209
Lysophospholipase L1 or related esterase [Amino acid transport and metabolism].
COG0657 Aes 1.17e-20 31 246 76 310
Acetyl esterase/lipase [Lipid transport and metabolism].
pfam13472 Lipase_GDSL_2 1.50e-14 264 459 3 175
GDSL-like Lipase/Acylhydrolase family. This family of presumed lipases and related enzymes are similar to pfam00657.
cd00229 SGNH_hydrolase 2.23e-13 260 468 2 187
SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWV32848.1 0.0 1 486 1 486
ASR46787.1 6.39e-247 1 471 1 470
AET61722.1 2.46e-244 1 471 1 470
ALP38419.1 1.52e-243 1 473 1 472
QDY83297.1 1.10e-240 1 476 1 475

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6A6O_A 5.66e-62 23 249 43 282
ChainA, Esterase/lipase-like protein [Caldicellulosiruptor lactoaceticus 6A]
3HXK_A 1.79e-35 19 247 23 265
CrystalStructure of a sugar hydrolase (YeeB) from Lactococcus lactis, Northeast Structural Genomics Consortium Target KR108 [Lactococcus lactis subsp. lactis],3HXK_B Crystal Structure of a sugar hydrolase (YeeB) from Lactococcus lactis, Northeast Structural Genomics Consortium Target KR108 [Lactococcus lactis subsp. lactis],3HXK_C Crystal Structure of a sugar hydrolase (YeeB) from Lactococcus lactis, Northeast Structural Genomics Consortium Target KR108 [Lactococcus lactis subsp. lactis],3HXK_D Crystal Structure of a sugar hydrolase (YeeB) from Lactococcus lactis, Northeast Structural Genomics Consortium Target KR108 [Lactococcus lactis subsp. lactis]
3BJR_A 1.83e-31 35 245 51 281
ChainA, Putative carboxylesterase [Lactiplantibacillus plantarum WCFS1]
4Q3K_A 3.71e-30 15 243 43 254
Crystalstructure of MGS-M1, an alpha/beta hydrolase enzyme from a Medee basin deep-sea metagenome library [unidentified],4Q3K_B Crystal structure of MGS-M1, an alpha/beta hydrolase enzyme from a Medee basin deep-sea metagenome library [unidentified]
7DWC_A 4.92e-28 16 243 33 261
ChainA, Xylanase [Bacteroides thetaiotaomicron VPI-5482],7DWC_B Chain B, Xylanase [Bacteroides thetaiotaomicron VPI-5482],7DWC_C Chain C, Xylanase [Bacteroides thetaiotaomicron VPI-5482],7DWC_D Chain D, Xylanase [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O31523 9.74e-57 259 471 7 214
Rhamnogalacturonan acetylesterase RhgT OS=Bacillus subtilis (strain 168) OX=224308 GN=rhgT PE=1 SV=1
O31528 1.37e-42 256 471 1 204
Probable rhamnogalacturonan acetylesterase YesY OS=Bacillus subtilis (strain 168) OX=224308 GN=yesY PE=1 SV=1
D5EV35 3.23e-37 37 470 50 480
Acetylxylan esterase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=axeA1 PE=1 SV=1
P26223 2.74e-33 5 228 368 612
Endo-1,4-beta-xylanase B OS=Butyrivibrio fibrisolvens OX=831 GN=xynB PE=3 SV=1
Q5BAA2 3.62e-12 256 469 16 224
Rhamnogalacturonan acetylesterase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=AN2528 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000022 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002414_01926.