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CAZyme Information: MGYG000002414_03453
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Paenibacillus odorifer | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus odorifer | |||||||||||
| CAZyme ID | MGYG000002414_03453 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3905300; End: 3906754 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 200 | 455 | 4.3e-42 | 0.7292307692307692 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00295 | Glyco_hydro_28 | 2.30e-12 | 227 | 454 | 88 | 305 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| COG5434 | Pgu1 | 1.64e-11 | 225 | 353 | 239 | 371 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03010 | PLN03010 | 2.46e-06 | 201 | 299 | 137 | 234 | polygalacturonase |
| PLN02218 | PLN02218 | 1.06e-05 | 232 | 454 | 200 | 410 | polygalacturonase ADPG |
| PLN03003 | PLN03003 | 1.68e-04 | 197 | 350 | 115 | 256 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWV34205.1 | 0.0 | 1 | 484 | 1 | 484 |
| AIQ74885.1 | 0.0 | 1 | 484 | 1 | 484 |
| ASA22158.1 | 9.28e-263 | 1 | 479 | 1 | 480 |
| AIQ18871.1 | 3.81e-258 | 1 | 479 | 1 | 480 |
| CQR56347.1 | 4.82e-251 | 1 | 479 | 1 | 480 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2IQ7_A | 1.83e-07 | 233 | 454 | 109 | 321 | Crystalstructure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q5AYH4 | 2.51e-10 | 272 | 454 | 334 | 500 | Probable endopolygalacturonase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaD PE=3 SV=1 |
| A1DBR6 | 2.20e-09 | 272 | 454 | 290 | 456 | Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1 |
| Q873X6 | 1.86e-07 | 201 | 397 | 145 | 352 | Probable exopolygalacturonase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgxB PE=2 SV=1 |
| Q949Z1 | 1.42e-06 | 227 | 460 | 213 | 438 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1 |
| A2R8F8 | 2.63e-06 | 256 | 454 | 168 | 352 | Probable endopolygalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000079 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |