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CAZyme Information: MGYG000002416_01834

You are here: Home > Sequence: MGYG000002416_01834

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Hydrogeniiclostridium mannosilyticum
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Hydrogeniiclostridium; Hydrogeniiclostridium mannosilyticum
CAZyme ID MGYG000002416_01834
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
705 MGYG000002416_5|CGC3 81303.56 5.2289
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002416 3014016 Isolate Russia Europe
Gene Location Start: 182256;  End: 184373  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002416_01834.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 268 702 1.5e-43 0.8511904761904762

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 4.94e-11 373 701 10 336
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
COG3408 GDB1 4.27e-04 409 623 288 509
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].
pfam08531 Bac_rhamnosid_N 0.005 37 98 2 68
Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AJY74261.1 1.15e-219 6 703 18 722
QNK54884.1 1.67e-207 4 701 8 710
QTH41646.1 5.97e-206 45 701 3 666
BBD46135.1 1.86e-199 9 699 50 749
QGY42778.1 3.39e-198 5 699 37 740

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000073 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002416_01834.