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CAZyme Information: MGYG000002418_00505

You are here: Home > Sequence: MGYG000002418_00505

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides chinchillae
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides chinchillae
CAZyme ID MGYG000002418_00505
CAZy Family GH2
CAZyme Description Exo-beta-D-glucosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
854 MGYG000002418_1|CGC10 96999.99 6.6848
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002418 3822361 Isolate not provided not provided
Gene Location Start: 576026;  End: 578590  Strand: +

Full Sequence      Download help

MLLCATVLSV  QAQKSMDEID  RESFNAQYKP  FQKAGISVTL  KPQAIIHSQP  TKDLMLNGNW60
QLAKGGNEKE  RLGGNWSDAI  TASVPGSVHG  SLWKAGIIPD  PYLRQNDSIA  TRQSYEAAWW120
YKKEFSITDK  LNAPRLIFDG  IANKCTVWLN  GVKLGNHEGM  FGGPFFDVNK  LLKEKNTLIV180
KLEPIPRIFE  ENDSTLSNTS  WRNTVVFNCV  YGWHYSRIPS  LGIWRPVYIK  NHASVEIEHP240
FIATRSLDGD  MSLQLTLRSA  SDKPKGTLKV  SVLPDNFEGE  ETSFDYKIAS  SRKEETVCFD300
FKIKNPRLWW  PNGKGDPNLY  KLKISFVPDN  QGTADYAETS  FGIRTIKMAP  SPEGVSPDRY360
NWTFVINDKP  MFVKGTGWCT  MDQLMDFPRE  KYDHLLSIAK  QQNIQMLRAW  GGGIPETDDF420
YDLCNRYGIM  IIQEWPTAWD  SHLTQPYNVL  KETVELNTLR  IRNNPCLVMY  GGGNESPAPF480
GEAIDMIGRT  SIELDGTRPF  HRGEPWGGST  HNYYCWWERA  HLNHALNMTS  PFWGEFGIAS540
LPQKESVMKY  LSDSEKNVWP  LGQKSDFVHH  TPIFGIASDL  QRLAQYSGYL  MPDNTIDHFI600
TGSQLAQVVA  VRHTLERART  RWPESSGALY  YKLNDNYPAA  SWAAVDWFGA  IKPIHYFVQN660
SFAPLASVIL  FNQTNMSSQA  VSLPVFLLDD  NLDLKGKSWE  INISCYNHTL  ALIKQESFQG720
KDNQKEVNQL  GSLNLDTDQT  RSPALLFVSE  VRSEDKLLFR  TFYFMNFEVQ  KGSLFNLPRT780
TLATERSGNR  ITITNTGKLP  AVGVNIQCPE  NEYRLIVSEN  FFWLNPGESK  TVDVNLSKEI840
KTDCWNLEGN  PFIN854

Enzyme Prediction      help

No EC number prediction in MGYG000002418_00505.

CAZyme Signature Domains help

Created with Snap428512817021325629834138442746951255559764068372576881148683GH2
Family Start End Evalue family coverage
GH2 48 683 3e-85 0.636968085106383

CDD Domains      download full data without filtering help

Created with Snap428512817021325629834138442746951255559764068372576881156699LacZ121501ebgA56499PRK10150235344Glyco_hydro_2364501Glyco_hydro_2_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 1.10e-44 56 699 15 672
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10340 ebgA 1.13e-16 121 501 113 473
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK10150 PRK10150 1.68e-16 56 499 15 444
beta-D-glucuronidase; Provisional
pfam00703 Glyco_hydro_2 4.90e-13 235 344 1 106
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
pfam02836 Glyco_hydro_2_C 4.03e-09 364 501 8 159
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Created with Snap42851281702132562983413844274695125555976406837257688112848QNL39861.1|GH22848SCV07058.1|GH22848QRQ54566.1|GH22848ALJ47660.1|GH22848QRM99695.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QNL39861.1 0.0 2 848 11 853
SCV07058.1 0.0 2 848 11 853
QRQ54566.1 0.0 2 848 11 853
ALJ47660.1 0.0 2 848 11 853
QRM99695.1 0.0 2 848 11 853

PDB Hits      download full data without filtering help

Created with Snap4285128170213256298341384427469512555597640683725768811477645N6U_A548322VJX_A548322JE8_A548327OP6_A548322WBK_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5N6U_A 1.51e-68 47 764 20 745
Crystalstructure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12],5N6U_B Crystal structure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12],5N6U_C Crystal structure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12],5N6U_D Crystal structure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12]
2VJX_A 6.00e-59 54 832 9 814
Structuraland biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VJX_B Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VL4_A Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VL4_B Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VMF_A Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VMF_B Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VO5_A Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VO5_B Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VOT_A Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VOT_B Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VQT_A Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron],2VQT_B Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron],2VR4_A Transition-state mimicry in mannoside hydrolysis: characterisation of twenty six inhibitors and insight into binding from linear free energy relationships and 3-D structure [Bacteroides thetaiotaomicron VPI-5482],2VR4_B Transition-state mimicry in mannoside hydrolysis: characterisation of twenty six inhibitors and insight into binding from linear free energy relationships and 3-D structure [Bacteroides thetaiotaomicron VPI-5482]
2JE8_A 6.12e-59 54 832 11 816
Structureof a beta-mannosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],2JE8_B Structure of a beta-mannosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
7OP6_A 6.19e-59 54 832 11 816
ChainA, Beta-mannosidase [Bacteroides thetaiotaomicron VPI-5482],7OP6_B Chain B, Beta-mannosidase [Bacteroides thetaiotaomicron VPI-5482],7OP7_A Chain A, Beta-mannosidase [Bacteroides thetaiotaomicron VPI-5482],7OP7_B Chain B, Beta-mannosidase [Bacteroides thetaiotaomicron VPI-5482]
2WBK_A 1.51e-58 54 832 9 814
Structureof the Michaelis complex of beta-mannosidase, Man2A, provides insight into the conformational itinerary of mannoside hydrolysis [Bacteroides thetaiotaomicron VPI-5482],2WBK_B Structure of the Michaelis complex of beta-mannosidase, Man2A, provides insight into the conformational itinerary of mannoside hydrolysis [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Created with Snap428512817021325629834138442746951255559764068372576881156668sp|Q4FZV0|MANBA_RAT54668sp|Q95327|MANBA_CAPHI56668sp|Q8K2I4|MANBA_MOUSE56682sp|O00462|MANBA_HUMAN54668sp|Q29444|MANBA_BOVIN
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q4FZV0 4.04e-49 56 668 25 694
Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1
Q95327 3.10e-48 54 668 23 694
Beta-mannosidase OS=Capra hircus OX=9925 GN=MANBA PE=1 SV=1
Q8K2I4 4.15e-48 56 668 25 694
Beta-mannosidase OS=Mus musculus OX=10090 GN=Manba PE=1 SV=1
O00462 3.20e-47 56 682 25 708
Beta-mannosidase OS=Homo sapiens OX=9606 GN=MANBA PE=1 SV=3
Q29444 7.67e-47 54 668 23 694
Beta-mannosidase OS=Bos taurus OX=9913 GN=MANBA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.004650 0.994235 0.000285 0.000339 0.000244 0.000222

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002418_00505.