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CAZyme Information: MGYG000002418_00537

You are here: Home > Sequence: MGYG000002418_00537

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides chinchillae
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides chinchillae
CAZyme ID MGYG000002418_00537
CAZy Family GH2
CAZyme Description Beta-galactosidase BoGH2A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
833 MGYG000002418_1|CGC11 93985.28 6.4355
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002418 3822361 Isolate not provided not provided
Gene Location Start: 621722;  End: 624223  Strand: -

Full Sequence      Download help

MKKICLVLLG  LCGMLTNLPA  QVRNEFLLEK  NWKFTREDNP  EFVNPSFNDS  KWQSVTVPHD60
WAIYGPFSAQ  NDKQDVAIAQ  DGQKEAMEHA  GRTGGLPFVG  VGWYRTQFDV  PQFAPGKRAF120
ILFDGAMSHA  NVYVNGEKVG  YWPYGYNSFH  FDITKYLKPG  EKNTLAVRLE  NLPESSRWYP180
GAGLYRNVHV  IVTEDAHIPV  WGTYVTTPEV  NKQFAKINVQ  TKVELPEGAD  LSKYSLVTSI240
WNPNKQKLTE  TTASLSQLPY  NNGSVNQEFI  VRTPTLWSPD  MPALYVAETR  LYESTALKDI300
YSTPFGIRSI  EIIPEKGFFL  NGEKTVFKGV  CNHHDLGPLG  AAVNDAAVRR  QIRILKDMGC360
NAIRTSHNMP  APELVKACDE  MGMMLMAESF  DEWNVAKCKN  GYNLLFDEWV  EKDLVNLIHN420
FRNNPSVVMW  CIGNEVPNQW  NEGDCKIAKR  LQDICHREDP  TRPVTQGMDA  PDAVVNNNFA480
AVMDVAGFNY  RPQFYKVNYK  KLPQGIILGS  ETASTVSSRG  VYKFPVERKA  MAVYDDNQSS540
SYDVEHCSWS  NLPEDDFIQH  EDLPYCIGEF  VWTGFDYLGE  PTPYYTNWPS  HSSLFGIIDL600
AGIPKDRYYL  YRSHWNKAER  TLHILPHWTW  PGREGETTPV  FVYTNYPSAE  LFINGKSQGK660
RTKDLSIGID  SSYTDAAKAA  FERQKRYRLM  WMDTKYEPGT  LKVVAYDKDG  NAVAEEEVHT720
AGKPHHIELT  ADRKQLTADG  KDLSFINVRV  VDKDGNLCPN  DTRQIKFEVR  GAGSYHAAAN780
GNSASLESFQ  APHMKLFSGQ  LTAIVQTSEQ  PGIIFFEASA  PGVKGAKIEL  ISK833

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Created with Snap418312416620824929133337441645849954158362466670874979123608GH2
Family Start End Evalue family coverage
GH2 23 608 1.5e-121 0.601063829787234

CDD Domains      download full data without filtering help

Created with Snap418312416620824929133337441645849954158362466670874979114636LacZ727829Glyco_hydro2_C598484PRK1015023464ebgA17464lacZ
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 9.79e-59 14 636 1 621
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam18565 Glyco_hydro2_C5 2.23e-42 727 829 1 103
Glycoside hydrolase family 2 C-terminal domain 5. Domain 5 is found in dimeric beta-D-galactosidase from Paracoccus sp. 32d, which contributes to stabilization of the functional dimer. It is suggested that the location of this domain 5, may be one of the factors responsible for the creation of a functional dimer and cold-adaptation of this enzyme.
PRK10150 PRK10150 1.24e-41 98 484 63 462
beta-D-glucuronidase; Provisional
PRK10340 ebgA 1.23e-39 23 464 39 472
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 3.84e-29 17 464 46 485
beta-galactosidase.

CAZyme Hits      help

Created with Snap41831241662082492913333744164584995415836246667087497917833ABR43711.1|GH27833QRO16108.1|GH27833QUT94278.1|GH27833AST54561.1|GH27833QUR47264.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
ABR43711.1 0.0 7 833 8 834
QRO16108.1 0.0 7 833 8 834
QUT94278.1 0.0 7 833 8 834
AST54561.1 0.0 7 833 8 834
QUR47264.1 0.0 7 833 8 834

PDB Hits      download full data without filtering help

Created with Snap4183124166208249291333374416458499541583624666708749791208275T98_A318327CWD_A308234YPJ_A298306QUB_B298306QUB_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5T98_A 1.15e-231 20 827 22 815
Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis]
7CWD_A 7.53e-190 31 832 9 801
ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans]
4YPJ_A 1.82e-189 30 823 14 798
ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans]
6QUB_B 1.80e-151 29 830 13 851
Truncatedbeta-galactosidase III from Bifidobacterium bifidum in complex with galactose [Bifidobacterium bifidum]
6QUB_A 3.84e-151 29 830 36 874
Truncatedbeta-galactosidase III from Bifidobacterium bifidum in complex with galactose [Bifidobacterium bifidum],6QUC_A Truncated beta-galactosidase III from Bifidobacterium bifidum [Bifidobacterium bifidum],6QUC_B Truncated beta-galactosidase III from Bifidobacterium bifidum [Bifidobacterium bifidum],6QUD_A 2-deoxy-galactose reaction intermediate of a Truncated beta-galactosidase III from Bifidobacterium bifidum [Bifidobacterium bifidum]

Swiss-Prot Hits      download full data without filtering help

Created with Snap41831241662082492913333744164584995415836246667087497919830sp|A7LXS9|BGH2A_BACO14811sp|T2KM09|PLH16_FORAG31820sp|P77989|BGAL_THEP328667sp|T2KPJ7|PLH8_FORAG18832sp|T2KN75|PLH17_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7LXS9 1.77e-191 9 830 30 846
Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1
T2KM09 2.25e-108 4 811 28 799
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2
P77989 1.04e-56 31 820 11 725
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
T2KPJ7 3.90e-53 28 667 56 681
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1
T2KN75 1.51e-52 18 832 21 795
Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.009767 0.954922 0.034248 0.000397 0.000321 0.000318

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002418_00537.