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CAZyme Information: MGYG000002424_00051

You are here: Home > Sequence: MGYG000002424_00051

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Monoglobus pectinilyticus
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales; Monoglobaceae; Monoglobus; Monoglobus pectinilyticus
CAZyme ID MGYG000002424_00051
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
708 77566.7 4.6411
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002424 2757122 Isolate New Zealand Oceania
Gene Location Start: 52686;  End: 54812  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002424_00051.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 230 431 6.2e-29 0.8960396039603961
CBM13 563 707 2.1e-19 0.6968085106382979

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.63e-22 169 515 17 343
Pectate lyase [Carbohydrate transport and metabolism].
pfam14200 RicinB_lectin_2 2.16e-18 560 643 10 89
Ricin-type beta-trefoil lectin domain-like.
smart00656 Amb_all 2.51e-15 245 431 12 187
Amb_all domain.
pfam14200 RicinB_lectin_2 1.10e-13 603 692 5 89
Ricin-type beta-trefoil lectin domain-like.
NF035929 lectin_1 9.47e-10 570 702 718 834
lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUO18238.1 0.0 1 708 1 708
CDM70399.1 1.20e-291 2 708 1 697
ASR46637.1 6.92e-165 3 532 5 536
ANY68265.1 6.90e-157 2 532 4 538
CBL17651.1 5.31e-101 15 702 10 685

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3KRG_A 5.21e-07 279 428 149 323
ChainA, Pectate lyase [Bacillus subtilis]
5AMV_A 1.60e-06 279 428 149 323
Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168]
1BN8_A 1.68e-06 279 428 170 344
BacillusSubtilis Pectate Lyase [Bacillus subtilis]
3ZSC_A 1.75e-06 199 400 20 213
Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]
2BSP_A 3.87e-06 279 428 170 344
ChainA, PROTEIN (PECTATE LYASE) [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P94449 3.71e-17 181 513 34 336
Pectin lyase OS=Bacillus subtilis OX=1423 GN=pelB PE=1 SV=1
O34819 4.98e-17 181 494 34 320
Pectin lyase OS=Bacillus subtilis (strain 168) OX=224308 GN=pelB PE=3 SV=1
P27027 1.06e-16 182 504 10 297
Pectin lyase OS=Pseudomonas marginalis OX=298 GN=pnl PE=1 SV=2
Q00645 5.95e-15 196 486 43 319
Pectate lyase plyB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyB PE=1 SV=1
B8NBC2 3.48e-14 196 471 43 303
Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000480 0.998803 0.000221 0.000150 0.000147 0.000143

TMHMM  Annotations      download full data without filtering help

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