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CAZyme Information: MGYG000002436_01508
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pigmentiphaga sp002188635 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Pigmentiphaga; Pigmentiphaga sp002188635 | |||||||||||
| CAZyme ID | MGYG000002436_01508 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | Membrane-bound lytic murein transglycosylase D | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 284853; End: 286373 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH23 | 154 | 296 | 1.1e-23 | 0.9259259259259259 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK10783 | mltD | 9.47e-95 | 26 | 490 | 6 | 431 | membrane-bound lytic murein transglycosylase D; Provisional |
| cd16894 | MltD-like | 4.95e-62 | 162 | 290 | 1 | 128 | Membrane-bound lytic murein transglycosylase D and similar proteins. Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). |
| pfam01464 | SLT | 5.36e-24 | 167 | 265 | 11 | 110 | Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. |
| cd00254 | LT-like | 3.45e-19 | 177 | 285 | 10 | 105 | lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
| COG1388 | LysM | 6.04e-15 | 395 | 505 | 1 | 110 | LysM repeat [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AZG11829.1 | 0.0 | 51 | 506 | 1 | 456 |
| QEI05312.1 | 2.11e-195 | 28 | 505 | 7 | 515 |
| QDQ89198.1 | 1.42e-180 | 28 | 505 | 14 | 459 |
| QBR41863.1 | 1.20e-179 | 22 | 505 | 2 | 460 |
| AZV94937.1 | 1.70e-179 | 22 | 505 | 2 | 460 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P0AEZ7 | 9.35e-58 | 111 | 490 | 58 | 428 | Membrane-bound lytic murein transglycosylase D OS=Escherichia coli (strain K12) OX=83333 GN=mltD PE=1 SV=1 |
| P0AEZ8 | 9.35e-58 | 111 | 490 | 58 | 428 | Membrane-bound lytic murein transglycosylase D OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mltD PE=3 SV=1 |
| P32820 | 4.64e-29 | 150 | 310 | 21 | 178 | Putative tributyltin chloride resistance protein OS=Alteromonas sp. (strain M-1) OX=29457 GN=tbtA PE=3 SV=1 |
| P37710 | 2.78e-07 | 389 | 506 | 368 | 473 | Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2 |
| P54421 | 2.48e-06 | 383 | 506 | 87 | 193 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.003458 | 0.229531 | 0.766774 | 0.000204 | 0.000047 | 0.000012 |