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CAZyme Information: MGYG000002436_03762

You are here: Home > Sequence: MGYG000002436_03762

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pigmentiphaga sp002188635
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Pigmentiphaga; Pigmentiphaga sp002188635
CAZyme ID MGYG000002436_03762
CAZy Family GT73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
309 MGYG000002436_39|CGC1 34587.62 9.8344
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002436 5862145 Isolate Canada North America
Gene Location Start: 39493;  End: 40422  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002436_03762.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT73 67 298 3.8e-62 0.9551020408163265

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09822 PRK09822 1.25e-09 196 298 154 253
lipopolysaccharide core biosynthesis protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZG08983.1 2.65e-198 1 308 1 308
QYD72567.1 4.27e-101 5 308 30 333
QIE24522.1 1.25e-96 4 307 29 332
QIN62414.1 1.25e-96 4 307 29 332
QDQ83367.1 2.52e-96 5 306 30 331

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000054 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002436_03762.