CAZyme Information: MGYG000002439_03335

Basic Information

• Species: CHH4-2 sp002899675
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CHH4-2; CHH4-2 sp002899675
• CAZyme ID: MGYG000002439_03335
• CAZy Family: PL11
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
679	MGYG000002439_16|CGC4	78617.16	4.8771

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002439	6089737	Isolate	Taiwan	Asia

• Gene Location: Start: 64903; End: 66942 Strand: +

Full Sequence      

MNEQVLLFQDDFSSFKIGPFPYDPDHSAMGEYHYYPVKGYTGQWYDPIVCTNYRGPSWLV
TEMNGVKYMEQMRVRNPLTRGVCPVLAAGEDDWEDYEAGVRVRALDTKEETGLLFRYHTS
LMHYAFYLCGQKAQIWKIEKKNRTLLAETDYPYNCDSYYDLKVICKGSRFTCSVNGEEVL
ETEDGRYRYGKIGLSSYMPAQFTGVWVKTDRDSYETLLKKRAAYQKRLAEKRQKYARPKL
HKVIDLQNYGAARQVRFGHLTGGNTWYFVMAQHQKRVFKDRYSVISCLTAVNMENGNILW
QIGEPSELKDNQNVTADLPFQVYDIDNDGADEVIVSRDFKLMILNGRTGEVIRYVDTPYN
EDPADQILGIEFQKHAFDRVNVDAIRIVNVSGNERPSDIMIKDRYARIWVYDSMLNLKWK
FNHNNTGHFPYAYDFNGDGKDEIFSCYNMISSDGKLIWQLPIDRDHTDEIIVGQFDPDEE
EQIAIVSGWEGFMIVDKQGNIKVRDINGHGQRISTANYCPERKGLEICTTTYWEYQGIVY
LYDCKGNEIWHREDGSNGNIIAPVNWQGDGTELILLNGNVKFGGMMDGDGDVVVSFPDDG
HPDLCAEVIDLTGDKRDEIVLWDAEKMYIYTQDRACDREDGLEYAPEKYPHYNASNYRGE
FSFARWVEKEKDRKGTYGF

Enzyme Prediction     

No EC number prediction in MGYG000002439_03335.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL11	341	635	6.6e-20	0.49834983498349833

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd10318	RGL11	3.79e-08	234	631	92	527	Rhamnogalacturonan lyase of the polysaccharide lyase family 11. The rhamnogalacturonan lyase of the polysaccharide lyase family 11 (RGL11) cleaves glycoside bonds in polygalacturonan as well as RG (rhamnogalacturonan) type-I through a beta-elimination reaction. Functionally characterized members of this family, YesW and YesX from Bacillus subtilis, cleave glycoside bonds between rhamnose and galacturonic acid residues in the RG-I region of plant cell wall pectin. YesW and YesX work synergistically, with YesW cleaving the glycoside bond of the RG chain endolytically, and YesX converting the resultant oligosaccharides through an exotype reaction. This domain is sometimes found in architectures with non-catalytic carbohydrate-binding modules (CBMs). There are two types of RG lyases, which both cleave the alpha-1,4 bonds of the RG-I main chain through a beta-elimination reaction, but belong to two structurally unrelated polysaccharide lyase (PL) families, 4 and 11.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AGC68608.1	0.0	2	670	3	670
ANW98952.1	0.0	2	670	3	670
ANX01481.1	0.0	2	670	3	670
AGI39619.1	0.0	2	670	3	670
QTQ17316.1	0.0	1	675	1	678

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000050	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002439_03335.