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CAZyme Information: MGYG000002439_03858
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CHH4-2 sp002899675 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CHH4-2; CHH4-2 sp002899675 | |||||||||||
| CAZyme ID | MGYG000002439_03858 | |||||||||||
| CAZy Family | PL15 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 112897; End: 115197 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL15 | 479 | 632 | 1e-53 | 0.9928057553956835 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam16332 | DUF4962 | 9.44e-26 | 17 | 424 | 22 | 451 | Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown. |
| pfam07940 | Hepar_II_III | 2.47e-18 | 466 | 714 | 7 | 220 | Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWV32994.1 | 1.00e-217 | 12 | 726 | 23 | 732 |
| QCT03372.1 | 3.69e-217 | 16 | 722 | 30 | 736 |
| QZN78094.1 | 4.54e-217 | 12 | 721 | 30 | 752 |
| QOS77195.1 | 7.28e-216 | 12 | 721 | 30 | 752 |
| AIQ73651.1 | 7.31e-215 | 12 | 726 | 23 | 732 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3A0O_A | 3.48e-203 | 15 | 725 | 35 | 744 | Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58] |
| 3AFL_A | 1.11e-201 | 15 | 725 | 35 | 744 | Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58] |
| 6LJA_A | 1.41e-27 | 11 | 645 | 46 | 702 | ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393] |
| 6LJL_A | 2.80e-25 | 11 | 645 | 46 | 702 | ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393] |
| 2FUQ_A | 3.27e-08 | 105 | 659 | 21 | 568 | ChainA, heparinase II protein [Pedobacter heparinus],2FUQ_B Chain B, heparinase II protein [Pedobacter heparinus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| C6XZB6 | 1.81e-07 | 105 | 659 | 46 | 593 | Heparin and heparin-sulfate lyase OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) OX=485917 GN=hepB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000046 | 0.000005 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |