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CAZyme Information: MGYG000002440_01773

You are here: Home > Sequence: MGYG000002440_01773

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enteroscipio rubneri
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Eggerthellaceae; Enteroscipio; Enteroscipio rubneri
CAZyme ID MGYG000002440_01773
CAZy Family PL12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
550 MGYG000002440_11|CGC1 61719.27 4.924
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002440 2826736 Isolate Germany Europe
Gene Location Start: 19851;  End: 21503  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002440_01773.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL12 342 475 5.9e-22 0.9855072463768116

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 2.12e-34 331 490 1 165
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
COG5360 COG5360 2.09e-18 98 456 86 426
Uncharacterized conserved protein, heparinase superfamily [Function unknown].
pfam16889 Hepar_II_III_N 2.20e-11 87 310 81 317
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAK43911.1 1.61e-235 1 519 1 514
BCA89078.1 5.14e-178 43 541 2 495
BCS56822.1 4.18e-166 1 543 1 537
QNU66806.1 1.13e-106 6 492 4 499
QUO20838.1 4.17e-104 10 532 8 542

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MMH_A 8.78e-14 95 419 94 451
Crystalstructure of heparan sulfate lyase HepC from Pedobacter heparinus [Pedobacter heparinus]
4MMI_A 8.78e-14 95 419 94 451
Crystalstructure of heparan sulfate lyase HepC mutant from Pedobacter heparinus [Pedobacter heparinus]
4FNV_A 1.71e-10 2 418 58 514
CrystalStructure of Heparinase III [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q59289 4.90e-13 95 419 118 475
Heparin-sulfate lyase OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) OX=485917 GN=hepC PE=1 SV=1
Q89YR9 9.38e-10 2 418 58 514
Heparin-sulfate lyase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=hepC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000043 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002440_01773.