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CAZyme Information: MGYG000002442_03148
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Gordonibacter sp003339845 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Eggerthellaceae; Gordonibacter; Gordonibacter sp003339845 | |||||||||||
| CAZyme ID | MGYG000002442_03148 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 23045; End: 28648 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 1.21e-44 | 345 | 868 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG4646 | COG4646 | 2.95e-29 | 1011 | 1202 | 440 | 637 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| smart00490 | HELICc | 7.20e-08 | 1251 | 1337 | 1 | 82 | helicase superfamily c-terminal domain. |
| pfam00271 | Helicase_C | 7.30e-07 | 1266 | 1337 | 40 | 109 | Helicase conserved C-terminal domain. The Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase. |
| cd18793 | SF2_C_SNF | 9.47e-07 | 1276 | 1349 | 64 | 135 | C-terminal helicase domain of the SNF family helicases. The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 4.56e-258 | 57 | 1634 | 1561 | 3216 |
| QIW86704.1 | 3.39e-256 | 57 | 1510 | 1629 | 3159 |
| QIW86628.1 | 3.39e-256 | 57 | 1510 | 1629 | 3159 |
| AEY69616.1 | 5.71e-250 | 57 | 1647 | 1702 | 3372 |
| AXF51455.1 | 7.80e-250 | 57 | 1633 | 1795 | 3463 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 9.29e-40 | 131 | 1431 | 87 | 1605 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999778 | 0.000234 | 0.000002 | 0.000000 | 0.000000 | 0.000000 |