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CAZyme Information: MGYG000002445_00059

You are here: Home > Sequence: MGYG000002445_00059

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_Q sp003024715
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Clostridium_Q; Clostridium_Q sp003024715
CAZyme ID MGYG000002445_00059
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
425 MGYG000002445_1|CGC1 47371.23 4.6379
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002445 3277016 Isolate South Korea Asia
Gene Location Start: 57004;  End: 58281  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002445_00059.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 4.11e-14 350 411 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 2.06e-09 340 411 34 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 5.21e-08 327 413 103 185
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
pfam13620 CarboxypepD_reg 0.003 26 119 5 81
Carboxypeptidase regulatory-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASN94441.1 3.78e-224 20 424 11 415
QRP40879.1 3.78e-224 20 424 11 415
QJU21247.1 1.08e-223 20 424 11 415
QIX92999.1 2.94e-221 20 424 11 415
ANU48790.1 4.18e-221 20 424 11 415

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000052 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002445_00059.