CAZyme Information: MGYG000002449_02177

Basic Information

• Species: Parabacteroides acidifaciens
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides acidifaciens
• CAZyme ID: MGYG000002449_02177
• CAZy Family: PL35
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
619		70276.57	8.7915

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002449	5100482	Isolate	not provided	not provided

• Gene Location: Start: 67457; End: 69316 Strand: +

Full Sequence      

MKTRIIVFLMALLCYHCFSFAQKEFVSQSTRLGGHPRILLQKGEEKALKKVIMKDAIWKD
IHQSLLDEAEDIVKLPLNERIKTGKRLLSVSRENLRRIFILSYAYRMSGKSEFLKRAENE
MLKAASFSDWNPSHFLDVGEMTMALAIGYDWLYPQLSAQTKNVIEKAIVEKGLKPSFDER
YNWFVDAVHNWNQVCHAGVTYGALAIWEKEPELSRTVINRAIDKISIPMGHYAPDGAYPE
GVGYWDYGTSFNAMFLSAIEKIFGTDYGLSQLPGFLKTGEYILHAVTPSLKNFAYSDNGA
NAFLAPTMFWFYDKTKDASILYNQAQLYKKDGQKRIKRDRLAPAMLIWGASASLANPQKP
VQLSWKAQGDNPVCFMRSSWNDPLAVYIGVKMGSPSVNHGHMDVGSFLFEADGVLWGMDL
GGEDYNRLETRGVDLWNTKQNSQRWDVYRYNNLAHNTLSFNHKYQNVKGKAQIDGYSDQE
NNMYVISDLTAVYKDQVKSAKRAVSLVNKEYVVVEDMVEATQHFTMMTWTMVTPASAKIL
SDNVMLLEKDGKKLYVKVEGPKKVRWHISPAQSDFSCDSPNPGISVIGFDTDLELSAKQK
IKVFLLPGENKNVTYQSVL

Enzyme Prediction     

No EC number prediction in MGYG000002449_02177.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL35	385	562	1.6e-66	0.9776536312849162

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07940	Hepar_II_III	8.07e-04	399	565	39	199	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT50613.1	0.0	1	619	1	619
QGA22620.1	1.86e-250	1	619	1	618
BCG53903.1	5.24e-243	30	607	26	603
QGY42587.1	2.27e-213	25	609	17	600
QIP14356.1	3.54e-213	21	607	23	609

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3A0O_A	2.58e-06	35	522	139	651	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	3.39e-06	35	298	139	417	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000257	0.999131	0.000171	0.000142	0.000136	0.000128

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002449_02177.