CAZyme Information: MGYG000002449_02507

Basic Information

• Species: Parabacteroides acidifaciens
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides acidifaciens
• CAZyme ID: MGYG000002449_02507
• CAZy Family: GH141
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
705	MGYG000002449_29|CGC1	79904.19	6.3282

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002449	5100482	Isolate	not provided	not provided

• Gene Location: Start: 28793; End: 30910 Strand: +

Full Sequence      

MKSIFFAFTICLLSQTLDASVKIYVSPRGDDGNTGSLHQPLATFEGARDKIRELRLDKQI
TDTIFVEVQSGTYYISHAWMLTGKDSGTPQAPVIFRGDENDRPVVCGGKKTDRFEEVTPG
LWRVYIPEVADLGFYFEQLYVNGQRRFRAQTPNKGEFVKVKRIEETVLDASGSQGPTFAV
QKMVVPAEYLPILNDIDKSEWNDVLMVFYHKWDNTRKRVEHINALDSTICFTGEAMRVYN
KIDSQSLCVVENYRKALDSPGEWFLQRDGYLYYIPLPGETIEDTECVYPVTDKLLTITGD
EGKAVSSVRFENICFEATAYRTPPEGNEPMQAAAGIDAAIMLDYANNIEFVNCDIARTGQ
YAIWFRKHCSYSKVEHCHLYDLGGGGVKIGNYSSPEFIKTGQGETAATHHITVHNNIIQH
GGYVFPCAVGVIIFHGSDNTVTHNDIADLRYTGVSVGWIWGYAPSPSKRNKIEFNRIHHL
GWGELSDMGGVYTLGASEGTTVSNNVIHHIHSFTYGGWGLYTDEGSYGVCMENNLVYKCK
SAGFHQHYGRENVIRNNIFAFNLLSQMQLTRPEEHLSFSFINNIIYFDKGLLYMDKGSDS
WLKAQTVIDRNCYWDRRAPQPDFHGLSFSDWKKLGKDKHSIIADPLFVNPDAFDFRFSNP
RVAKKIGFKPFDYSRAGVYGDKEWKMKAVLTDELKEQFDALPVYQ

Enzyme Prediction     

No EC number prediction in MGYG000002449_02507.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH141	22	537	4.1e-106	0.9905123339658444

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13229	Beta_helix	3.05e-14	338	557	1	156	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	3.63e-14	408	559	8	134	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	7.13e-14	430	602	2	153	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	7.56e-11	339	506	25	157	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam05048	NosD	7.82e-07	389	562	1	175	Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGA25764.1	0.0	1	699	1	683
SCM58138.1	4.66e-292	8	701	8	700
QEC52583.1	2.01e-231	2	699	6	716
AWO00314.1	1.08e-223	21	701	35	696
AKP49975.1	3.93e-215	14	699	29	704

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQP_A	4.41e-47	22	534	26	580	Glycosidehydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_B Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_C Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_D Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_E Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_F Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_G Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_H Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000261	0.999127	0.000156	0.000152	0.000144	0.000136

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002449_02507.