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CAZyme Information: MGYG000002449_02608

You are here: Home > Sequence: MGYG000002449_02608

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides acidifaciens
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides acidifaciens
CAZyme ID MGYG000002449_02608
CAZy Family GH30
CAZyme Description Glucuronoxylanase XynC
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
480 MGYG000002449_31|CGC1 53977.79 5.2087
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002449 5100482 Isolate not provided not provided
Gene Location Start: 31625;  End: 33067  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002449_02608.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 30 473 4.5e-160 0.9933333333333333

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5520 XynC 4.83e-30 2 422 10 370
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam14587 Glyco_hydr_30_2 1.09e-13 29 362 3 366
O-Glycosyl hydrolase family 30.
pfam02055 Glyco_hydro_30 2.11e-09 41 224 1 190
Glycosyl hydrolase family 30 TIM-barrel domain.
pfam17189 Glyco_hydro_30C 0.001 390 474 1 63
Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQT78450.1 1.36e-175 3 479 2 491
QRP59665.1 1.36e-175 3 479 2 491
ASM65029.1 1.36e-175 3 479 2 491
QQY39420.1 1.14e-138 32 478 46 498
QQY42684.1 1.14e-138 32 478 46 498

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7O0E_A 9.79e-24 39 474 14 445
ChainA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
7NCX_AAA 5.43e-23 19 474 1 452
ChainAAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
6M5Z_A 3.21e-18 39 432 34 407
ChainA, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]
4FMV_A 5.28e-18 30 477 5 387
CrystalStructure Analysis of a GH30 Endoxylanase from Clostridium papyrosolvens C71 [Ruminiclostridium papyrosolvens DSM 2782]
5CXP_A 1.63e-17 39 473 15 384
X-raycrystallographic protein structure of the glycoside hydrolase family 30 subfamily 8 xylanase, Xyn30A, from Clostridium acetobutylicum [Clostridium acetobutylicum ATCC 824]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
G2Q1N4 5.39e-25 7 474 6 469
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
Q45070 2.04e-15 1 473 5 417
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1
Q6YK37 3.66e-15 139 473 112 418
Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2
P17439 2.59e-11 64 427 123 485
Lysosomal acid glucosylceramidase OS=Mus musculus OX=10090 GN=Gba PE=1 SV=1
Q9UB00 8.08e-11 29 233 87 298
Putative glucosylceramidase 4 OS=Caenorhabditis elegans OX=6239 GN=gba-4 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001784 0.554407 0.443042 0.000244 0.000272 0.000232

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002449_02608.