CAZyme Information: MGYG000002449_03277

Basic Information

• Species: Parabacteroides acidifaciens
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides acidifaciens
• CAZyme ID: MGYG000002449_03277
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1076		120762.15	5.6551

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002449	5100482	Isolate	not provided	not provided

• Gene Location: Start: 19367; End: 22597 Strand: -

Full Sequence      

MRKPLLKTLLCLSLLVPAMGSAQDKSTLESGFVNPSEKVQTSVYWYWISGNISEEGVRKD
LYSMKEAGINRAFIGNIGLDEIKTPYKTVPFGSEEWWKVLHAALKTATELGIEIGIFNSP
GWSQSGGPWVKPEQAMRYLTSVKAEVSGGKQVEVILAKPDKDFQDVKVIAFPSVSKNTAR
LSASNTKVSSSPALQNLSGLLDGDKETALLFTEKNDQPVTIDFQADKPFTLRSVQIYPAH
HPIQSTARLQVKENNSFRTIAEFKIDRFNANPNVGFDPYAPVVVSVPATTAGEFRLELNG
IAPGSGLSEVVFSSCPAVERYPEKTLAKMFQTPLPYWHEYQWPVQPEADDPSLTVDPDQV
LDISSCLQGDRLVWKAPAGDWTILRTGMLPTGVTNSPADPEATGLETDKMSRKHIETHFE
AYMGEIYRRIPAEDRKCWKVVVQDSYETGGQNFTDDFLREFQERYGYDPLPFLPVYEGYV
VKSQDQSDRFLWDLRRLIADKIAYDYVGGLRDVCHKYGLTTWLENYGHWGFPGEFLQYGG
QSDEIGGEFWSFGDLGNIENRAASSCGHIYGKQKISAESFTSGGTPFSCYPAMMKQRGDR
FFTEGINNTLLHVYISQPTEEREPGVNAWFSSEFNRLNTWYPQMDLFTSYLKRVNYMLQQ
GLNIADVAYFIGEDAPKMTGITEPELPKGYQFDYINAEVIERDLFVKDGLLTLPHGTQYR
ILVLPELETMRPELLAKIKKLIEDGAVVMGPAPLRSPSMQDYGKADRQVKTMAGELWGGL
DGQNVKAVKRGKGELLYGMNMAEALQHIGCVHDCGVPAEAPVLYGHRSAGDTEIYFISNQ
KEETIEISPELRVRSRQPELWDAMTGRVRTLPAYRQTATGTVVPLKLHPYESAFIVFRQP
AQKPEGTDLLLNYPAPQTLVRLDAPWKVSFEPKRRGPATPQTFTRLEDITKNENFDISHY
SGTIWYETDFALKKKPDGNLYLNLNDVGVMAKVKINGQYAGGVWTAPYRVNITDLVKKGK
NKVEVEVVTTWMNRLIGDSGLPQQERKTWTPCNIWKPTDALQKSGLIGPVCIESVN

Enzyme Prediction     

No EC number prediction in MGYG000002449_03277.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	341	1072	2.3e-229	0.8883495145631068

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	0.0	34	876	2	873	alpha-L-rhamnosidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT50381.1	0.0	1	1076	1	1075
QGA23785.1	0.0	28	1075	37	1081
QRQ58444.1	0.0	28	1075	31	1078
ALJ46926.1	0.0	28	1075	31	1078
QNL39141.1	0.0	28	1075	31	1078

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Q2F_A	4.86e-141	21	1070	35	1136	Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A	5.96e-104	8	1076	13	1102	Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A	1.56e-103	8	1076	13	1102	Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]
6D89_A	1.22e-06	910	1027	28	166	Bacteroidesuniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_B Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_C Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_D Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KNA8	9.31e-121	24	1073	26	1156	Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000333	0.998907	0.000229	0.000188	0.000160	0.000141

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002449_03277.