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CAZyme Information: MGYG000002449_03306

You are here: Home > Sequence: MGYG000002449_03306

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides acidifaciens
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides acidifaciens
CAZyme ID MGYG000002449_03306
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
986 MGYG000002449_50|CGC1 110818.58 5.328
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002449 5100482 Isolate not provided not provided
Gene Location Start: 25185;  End: 28145  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002449_03306.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 236 978 4.4e-227 0.8895631067961165

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 3.13e-175 54 767 12 870
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 2.88e-04 597 689 40 130
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SCM58877.1 0.0 10 981 14 978
AWW28678.1 0.0 36 979 38 978
AQQ70075.1 0.0 38 978 32 958
ARK11122.1 0.0 10 977 12 953
ACU03164.1 0.0 4 980 2 957

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 9.40e-119 38 978 42 1139
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A 3.08e-106 9 975 8 1096
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 8.14e-106 9 975 8 1096
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]
6D89_A 4.32e-06 816 927 38 168
Bacteroidesuniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_B Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_C Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_D Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 8.28e-155 38 977 30 1155
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000148 0.112502 0.887194 0.000051 0.000051 0.000045

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002449_03306.