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CAZyme Information: MGYG000002449_03688

You are here: Home > Sequence: MGYG000002449_03688

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides acidifaciens
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides acidifaciens
CAZyme ID MGYG000002449_03688
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1084 MGYG000002449_67|CGC1 121387.14 6.1728
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002449 5100482 Isolate not provided not provided
Gene Location Start: 12441;  End: 15695  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002449_03688.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 370 1080 1.3e-198 0.883495145631068

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 0.0 57 884 9 869
alpha-L-rhamnosidase.
pfam02837 Glyco_hydro_2_N 1.68e-07 930 1080 4 165
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
pfam08531 Bac_rhamnosid_N 7.21e-07 981 1042 1 69
Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
COG3250 LacZ 2.08e-05 929 1082 14 178
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 8.63e-05 945 1039 40 137
beta-D-glucuronidase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGA22837.1 0.0 1 1084 1 1089
ATP56036.1 0.0 25 1084 25 1086
QGY42777.1 0.0 23 1080 24 1084
AIM36426.1 0.0 28 1084 30 1093
BBL06350.1 0.0 1 1080 1 1079

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 4.61e-126 47 1080 45 1138
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A 1.09e-113 45 1082 32 1100
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 2.88e-113 45 1082 32 1100
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 3.38e-95 45 1082 31 1157
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1
T2KPJ7 1.52e-06 947 1040 81 175
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.034878 0.963519 0.000564 0.000364 0.000323 0.000321

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002449_03688.