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CAZyme Information: MGYG000002455_01047

You are here: Home > Sequence: MGYG000002455_01047

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides cellulosilyticus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides cellulosilyticus
CAZyme ID MGYG000002455_01047
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
503 MGYG000002455_4|CGC1 55883.45 5.9136
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002455 6974062 Isolate United States North America
Gene Location Start: 49044;  End: 50555  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002455_01047.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 183 480 3.7e-38 0.7415384615384616

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 6.38e-17 110 344 135 367
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03003 PLN03003 3.07e-07 202 314 127 259
Probable polygalacturonase At3g15720
pfam00295 Glyco_hydro_28 1.97e-06 184 330 45 222
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 5.48e-04 192 288 141 233
polygalacturonase
PLN02793 PLN02793 0.002 192 288 145 253
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ62044.1 0.0 1 503 1 503
QUT92206.1 0.0 1 503 1 503
QUU00188.1 3.68e-305 5 502 1 497
AND18155.1 9.03e-287 5 503 1 499
QUT85456.1 9.03e-287 5 503 1 499

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000251 0.999126 0.000170 0.000145 0.000138 0.000126

TMHMM  Annotations      download full data without filtering help

start end
13 35