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CAZyme Information: MGYG000002455_01053

You are here: Home > Sequence: MGYG000002455_01053

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides cellulosilyticus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides cellulosilyticus
CAZyme ID MGYG000002455_01053
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
461 MGYG000002455_4|CGC1 51990.27 5.8422
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002455 6974062 Isolate United States North America
Gene Location Start: 59905;  End: 61290  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002455_01053.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 182 443 6.9e-44 0.7630769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.60e-11 197 455 230 470
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 7.52e-10 188 440 88 305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 7.05e-06 210 373 229 395
Probable polygalacturonase
pfam13229 Beta_helix 1.30e-04 188 319 26 149
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
PLN03010 PLN03010 4.54e-04 168 376 115 311
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT92200.1 0.0 1 461 1 461
ALJ62050.1 0.0 1 461 1 461
QUU00181.1 0.0 2 461 6 464
QUT34117.1 0.0 12 461 15 464
QJR77942.1 3.16e-288 13 461 16 464

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8MW78 1.01e-06 189 440 254 478
Probable endopolygalacturonase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaD PE=3 SV=1
Q2UT29 1.01e-06 189 440 254 478
Probable endopolygalacturonase D OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaD PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000315 0.998996 0.000213 0.000155 0.000151 0.000144

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002455_01053.